ENSMUSG00000015176


Mus musculus
bindingNolc1boxregulationhacaproteincomplexsnornatranscriptionnucleoluscellneuralcrestnucleusnuclearcdsnornpfactoractivitylishomologymotifsrpc-terminaltranslationresponseosmoticstressorganization

Features
Gene ID: ENSMUSG00000015176
  
Biological name :Nolc1
  
Synonyms : E9Q5C9 / Nolc1 / Nucleolar and coiled-body phosphoprotein 1
  
Possible biological names infered from orthology : Q14978
  
Species: Mus musculus
  
Chr. number: 19
Strand: 1
Band: C3
Gene start: 46075863
Gene end: 46085530
  
Corresponding Affymetrix probe sets: 10463535 (MoGene1.0st)   1428869_at (Mouse Genome 430 2.0 Array)   1428870_at (Mouse Genome 430 2.0 Array)   1450087_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000128331
Ensembl peptide - ENSMUSP00000153641
Ensembl peptide - ENSMUSP00000153600
Ensembl peptide - ENSMUSP00000153545
Ensembl peptide - ENSMUSP00000153329
Ensembl peptide - ENSMUSP00000152921
NCBI entrez gene - 70769     See in Manteia.
MGI - MGI:1918019
RefSeq - NM_053086
RefSeq - NM_001039353
RefSeq - NM_001039352
RefSeq - NM_001039351
RefSeq Peptide - NP_444316
RefSeq Peptide - NP_001034440
RefSeq Peptide - NP_001034441
RefSeq Peptide - NP_001034442
swissprot - A0A286YDV7
swissprot - A0A286YDZ1
swissprot - E9Q5C9
swissprot - A0A286YCD1
swissprot - A0A286YDA2
swissprot - A0A286YDT3
Ensembl - ENSMUSG00000015176
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nolc1ENSDARG00000024561Danio rerio
 NOLC1ENSGALG00000041124Gallus gallus
 NOLC1ENSG00000166197Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006594  LIS1 homology motif
 IPR007718  SRP40, C-terminal


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to abiotic stimuluscellular component organizationanatomical structure developmentcellular developmental processmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to abiotic stimuluscellular component organizationanatomical structure developmentcellular developmental processmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to abiotic stimuluscellular component organizationanatomical structure developmentcellular developmental processmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to abiotic stimuluscellular component organizationanatomical structure developmentcellular developmental processmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to abiotic stimuluscellular component organizationanatomical structure developmentcellular developmental processmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to abiotic stimuluscellular component organizationanatomical structure developmentcellular developmental processmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to abiotic stimuluscellular component organizationanatomical structure developmentcellular developmental processmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to abiotic stimuluscellular component organizationanatomical structure developmentcellular developmental processmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to abiotic stimuluscellular component organizationanatomical structure developmentcellular developmental processmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to abiotic stimuluscellular component organizationanatomical structure developmentcellular developmental processmacromolecule localizationestablishment of localizationcellular localizationnitrogen cnitrogen compound metabolic processbiosynthetbiosynthetic processcellular mcellular metabolic processprimary meprimary metabolic processorganic suorganic substance metabolic processresponse tresponse to stressresponse tresponse to abiotic stimuluscellular ccellular component organizationanatomicalanatomical structure developmentcellular dcellular developmental processmacromolecmacromolecule localizationestablishmestablishment of localizationcellular lcellular localization
protein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityamide bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityamide bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityamide bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityamide bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityamide bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityamide bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityamide bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityamide bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityamide bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityamide bindingprotein bindingprotein bindingorganic cyclic compound bindorganic cyclic compound bindingheterocyclic compound bindinheterocyclic compound bindingDNA-binding transcription faDNA-binding transcription factor activityamide bindingamide binding
cellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumenprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0006970 response to osmotic stress IEA
 biological_processGO:0007000 nucleolus organization IDA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0014029 neural crest formation IEA
 biological_processGO:0014032 neural crest cell development IEA
 biological_processGO:0033979 box H/ACA snoRNA metabolic process IEA
 biological_processGO:0042306 regulation of protein import into nucleus IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0015030 Cajal body IDA
 cellular_componentGO:0030532 small nuclear ribonucleoprotein complex TAS
 cellular_componentGO:0031428 box C/D snoRNP complex IEA
 cellular_componentGO:0031429 box H/ACA snoRNP complex IEA
 cellular_componentGO:0072588 box H/ACA RNP complex IEA
 molecular_functionGO:0001042 RNA polymerase I core binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0008139 nuclear localization sequence binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0034512 box C/D snoRNA binding IEA
 molecular_functionGO:0034513 box H/ACA snoRNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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