ENSMUSG00000020658


Mus musculus
membraneEfr3bplasmaarmadillo-likehelicalarmadillo-typefoldphosphatidylinositolphosphorylationproteinlocalizationcytoplasmcytosolmolecularfunctionbinding

Features
Gene ID: ENSMUSG00000020658
  
Biological name :Efr3b
  
Synonyms : B / Efr3b / Q6ZQ18
  
Possible biological names infered from orthology : EFR3 homolog B / Q9Y2G0
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: A1.1
Gene start: 3962554
Gene end: 4038915
  
Corresponding Affymetrix probe sets: 10399234 (MoGene1.0st)   1435123_at (Mouse Genome 430 2.0 Array)   1440580_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000151581
Ensembl peptide - ENSMUSP00000151788
Ensembl peptide - ENSMUSP00000106809
NCBI entrez gene - 668212     See in Manteia.
MGI - MGI:2444851
RefSeq - XM_006515163
RefSeq - XM_011243887
RefSeq - XM_011243888
RefSeq - NM_001082483
RefSeq Peptide - NP_001075952
swissprot - Q6ZQ18
swissprot - A0A1W2P7E0
swissprot - A0A1W2P7T9
Ensembl - ENSMUSG00000020658
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 efr3baENSDARG00000033516Danio rerio
 efr3bbENSDARG00000069318Danio rerio
 EFR3BENSGALG00000016605Gallus gallus
 EFR3BENSG00000084710Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Efr3a / Q8BG67 / Mus musculus EFR3 homolog A (Efr3a), transcript variant 2, mRNA. / Q14156* / EFR3 homolog A*ENSMUSG0000001500262


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
cellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic organic substance metabolic processmacromolecule localizationmacromolecule localizationcellular localizationcellular localization
cellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellcellmembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0046854 phosphatidylinositol phosphorylation IEA
 biological_processGO:0072659 protein localization to plasma membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005488 binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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