ENSMUSG00000021418


Mus musculus

Features
Gene ID: ENSMUSG00000021418
  
Biological name :Rpp40
  
Synonyms : Q8R1F9 / Ribonuclease P protein subunit p40 / Rpp40
  
Possible biological names infered from orthology : O75818 / ribonuclease P/MRP subunit p40
  
Species: Mus musculus
  
Chr. number: 13
Strand: -1
Band: A3.3
Gene start: 35893472
Gene end: 35906359
  
Corresponding Affymetrix probe sets: 10408666 (MoGene1.0st)   1424792_at (Mouse Genome 430 2.0 Array)   1443750_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000130290
Ensembl peptide - ENSMUSP00000134210
Ensembl peptide - ENSMUSP00000134228
NCBI entrez gene - 208366     See in Manteia.
MGI - MGI:1346084
RefSeq - XM_006516631
RefSeq - XM_011244302
RefSeq - NM_145938
RefSeq Peptide - NP_666050
swissprot - Q8R1F9
swissprot - G3UYU5
swissprot - G3UYT2
Ensembl - ENSMUSG00000021418
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpp40ENSDARG00000017605Danio rerio
 RPP40ENSGALG00000036074Gallus gallus
 RPP40ENSG00000124787Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013893  Ribonuclease P, Rpp40


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001682 tRNA 5"-leader removal ISO
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0090501 RNA phosphodiester bond hydrolysis IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005655 nucleolar ribonuclease P complex ISO
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0004526 ribonuclease P activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr