ENSMUSG00000021804


Mus musculus

Features
Gene ID: ENSMUSG00000021804
  
Biological name :Rgr
  
Synonyms : Q9Z2B3 / retinal G protein coupled receptor / Rgr
  
Possible biological names infered from orthology : P47804
  
Species: Mus musculus
  
Chr. number: 14
Strand: -1
Band: B
Gene start: 37034909
Gene end: 37048964
  
Corresponding Affymetrix probe sets: 10419005 (MoGene1.0st)   1422832_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000153012
Ensembl peptide - ENSMUSP00000153565
Ensembl peptide - ENSMUSP00000022338
Ensembl peptide - ENSMUSP00000153006
NCBI entrez gene - 57811     See in Manteia.
MGI - MGI:1929473
RefSeq - XM_011245125
RefSeq - NM_001301692
RefSeq - NM_001301694
RefSeq - NM_021340
RefSeq Peptide - NP_001288621
RefSeq Peptide - NP_001288623
RefSeq Peptide - NP_067315
swissprot - A0A286YCJ5
swissprot - Q9Z2B3
swissprot - Q543X1
swissprot - A0A286YCJ0
swissprot - A0A286YDT4
Ensembl - ENSMUSG00000021804
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rgraENSDARG00000054890Danio rerio
 rgrbENSDARG00000098724Danio rerio
 RGRENSGALG00000002299Gallus gallus
 RGRENSG00000148604Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR001793  Retinal pigment epithelium GPCR
 IPR017452  GPCR, rhodopsin-like, 7TM


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0007602 phototransduction IEA
 biological_processGO:0009584 detection of visible light IEA
 biological_processGO:0018298 protein-chromophore linkage IEA
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0008020 G-protein coupled photoreceptor activity IBA
 molecular_functionGO:0009881 photoreceptor activity IEA


Pathways (from Reactome)
Pathway description
G alpha (i) signalling events
Opsins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005253 abnormal eye physiology "anomalous function and/or activity of the ocular system or any of its parts" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Foxo4tm1Kca/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0005551 abnormal eye electrophysiology "abnormal function of the eye as determined through electrophysiological recordings from single cells or summary recordings from multiple cells (e.g. electroretinogram)" [NMF:Stephanie Pretel, Neuroscience Mutagenesis Facility Curator]
Show

Allelic Composition: Foxo4tm1Kca/Y
Genetic Background: involves: 129X1/SvJ * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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