ENSMUSG00000021904


Mus musculus

Features
Gene ID: ENSMUSG00000021904
  
Biological name :Sema3g
  
Synonyms : Q4LFA9 / Sema3g / Semaphorin-3G
  
Possible biological names infered from orthology : Q9NS98
  
Species: Mus musculus
  
Chr. number: 14
Strand: 1
Band: B
Gene start: 31217860
Gene end: 31230352
  
Corresponding Affymetrix probe sets: 10413733 (MoGene1.0st)   1435361_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000087643
NCBI entrez gene - 218877     See in Manteia.
MGI - MGI:3041242
RefSeq - NM_001025379
RefSeq - XM_006518821
RefSeq Peptide - NP_001020550
swissprot - Q4LFA9
Ensembl - ENSMUSG00000021904
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sema3blENSDARG00000007560Danio rerio
 SEMA3GENSGALG00000004476Gallus gallus
 Q9NS98ENSG00000010319Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P70275 / Sema3e / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E / O15041* / semaphorin 3E*ENSMUSG0000006353151
O08665 / Sema3a / Semaphorin-3A / Q14563*ENSMUSG0000002888345
Sema3b / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B / Q13214* / semaphorin 3B*ENSMUSG0000005796945
Q8BH34 / Sema3d / Semaphorin-3D / O95025*ENSMUSG0000004025443
O88632 / Sema3f / Semaphorin-3F / Q13275*ENSMUSG0000003468442
Q62181 / Sema3c / Semaphorin-3C / Q99985*ENSMUSG0000002878041
O09126 / Sema4d / Semaphorin-4D / Q92854*ENSMUSG0000002145129
Q9WUH7 / Sema4g / Semaphorin-4G / Q9NTN9*ENSMUSG0000002520729
Q9Z123 / Sema4f / Semaphorin-4F / O95754* / ssemaphorin 4F*ENSMUSG0000000062728
Q64151 / Sema4c / Semaphorin-4C / Q9C0C4*ENSMUSG0000002612128
Q62179 / Sema4b / Semaphorin-4B ENSMUSG0000003053928
Q62178 / Sema4a / Semaphorin-4A / Q9H3S1*ENSMUSG0000002806426


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR007110  Immunoglobulin-like domain
 IPR013151  Immunoglobulin
 IPR013783  Immunoglobulin-like fold
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR027231  Semaphorin
 IPR036179  Immunoglobulin-like domain superfamily
 IPR036352  Sema domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030517 negative regulation of axon extension IDA
 biological_processGO:0050919 negative chemotaxis IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0005102 signaling receptor binding IPI
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0038191 neuropilin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001879 abnormal lymphatic vessel morphology "malformation of the network of vessels which carries lymph around the body" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, tc:Teresa Chu , Mouse Genome Informatics Curator]
Show

Allelic Composition: Dmdtm1Kmf/Y
Genetic Background: involves: C57BL/6

Allelic Composition: Sema3ftm1.2Ddg/Sema3ftm1.2Ddg,Sema3gtm1(KOMP)Vlcg/Sema3gtm1(KOMP)Vlcg
Genetic Background: involves: C57BL/6NTac

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Map2k7tm2.1Rjd/Map2k7tm2.1Rjd
Genetic Background: B6.129S6-Map2k7tm2.1Rjd

 MP:0004106 lymphatic vessel hyperplasia "increased cell number in lymphatic vessels" [anna:Anna Anagnostopoulos, Mouse Genome Informatics Curator]
Show

Allelic Composition: Sema3ftm1.2Ddg/Sema3ftm1.2Ddg,Sema3gtm1(KOMP)Vlcg/Sema3gtm1(KOMP)Vlcg
Genetic Background: involves: C57BL/6NTac

 MP:0010197 abnormal lymphatic vessel endothelial cell morphology "any structural anomaly of the cells that line the lymphatic vessels" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Sema3ftm1.2Ddg/Sema3ftm1.2Ddg,Sema3gtm1(KOMP)Vlcg/Sema3gtm1(KOMP)Vlcg
Genetic Background: involves: C57BL/6NTac

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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