ENSMUSG00000022325


Mus musculus
ribonucleasePop1pmrptrnarnacomplexprocessingphosphodiesterbondhydrolysisactivitysubunitpoppopld-leaderremovalcatabolicprocessendonucleolyticnucleolarnucleolusmultimeric

Features
Gene ID: ENSMUSG00000022325
  
Biological name :Pop1
  
Synonyms : Pop1 / processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
  
Possible biological names infered from orthology : POP1 homolog, ribonuclease P/MRP subunit / Q99575
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: B3.1
Gene start: 34495304
Gene end: 34530648
  
Corresponding Affymetrix probe sets: 10423629 (MoGene1.0st)   1428458_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000052654
Ensembl peptide - ENSMUSP00000078037
NCBI entrez gene - 67724     See in Manteia.
MGI - MGI:1914974
RefSeq - NM_152894
RefSeq - NM_026340
RefSeq Peptide - NP_080616
RefSeq Peptide - NP_690854
swissprot - Q8K205
swissprot - Q9D4G5
Ensembl - ENSMUSG00000022325
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pop1ENSDARG00000102087Danio rerio
 POP1ENSGALG00000032042Gallus gallus
 POP1ENSG00000104356Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009723  Ribonuclease P/MRP, subunit POP1
 IPR012590  POPLD


Gene Ontology (GO)
nitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processnitrogen compound metabolic nitrogen compound metabolic processcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic organic substance metabolic processcatabolic processcatabolic process
hydrolase activitycatalytic activity, acting on RNAhydrolase activitycatalytic activity, acting on RNAhydrolase activitycatalytic activity, acting on RNAhydrolase activitycatalytic activity, acting on RNAhydrolase activitycatalytic activity, acting on RNAhydrolase activitycatalytic activity, acting on RNAhydrolase activitycatalytic activity, acting on RNAhydrolase activitycatalytic activity, acting on RNAhydrolase activitycatalytic activity, acting on RNAhydrolase activitycatalytic activity, acting on RNAhydrolase activityhydrolase activitycatalytic activity, acting on RNAcatalytic activity, acting on RNA
protein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexprotein-containing complexcellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumen
TypeGO IDTermEv.Code
 biological_processGO:0001682 tRNA 5"-leader removal ISO
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0008033 tRNA processing IBA
 biological_processGO:0016078 tRNA catabolic process ISO
 biological_processGO:0090501 RNA phosphodiester bond hydrolysis IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0000172 ribonuclease MRP complex ISO
 cellular_componentGO:0005655 nucleolar ribonuclease P complex ISO
 cellular_componentGO:0005730 nucleolus ISO
 cellular_componentGO:0030681 multimeric ribonuclease P complex ISO
 molecular_functionGO:0000171 ribonuclease MRP activity ISO
 molecular_functionGO:0004526 ribonuclease P activity ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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