ENSMUSG00000023348


Mus musculus

Features
Gene ID: ENSMUSG00000023348
  
Biological name :Trip6
  
Synonyms : Q9Z1Y4 / thyroid hormone receptor interactor 6 / Trip6
  
Possible biological names infered from orthology : Q15654
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: G2
Gene start: 137309654
Gene end: 137314404
  
Corresponding Affymetrix probe sets: 10534718 (MoGene1.0st)   1449041_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000024119
Ensembl peptide - ENSMUSP00000143687
NCBI entrez gene - 22051     See in Manteia.
MGI - MGI:1343458
RefSeq - NM_011639
RefSeq - XM_006504563
RefSeq Peptide - NP_035769
swissprot - B2RS30
swissprot - A0A0G2JGT2
swissprot - Q9Z1Y4
Ensembl - ENSMUSG00000023348
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trip6ENSDARG00000069331Danio rerio
 TRIP6ENSG00000087077Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lpp / Q8BFW7 / Lipoma-preferred partner homolog / Q93052* / LIM domain containing preferred translocation partner in lipoma*ENSMUSG0000003330652
Zyx / zyxin / Q62523 / Q15942*ENSMUSG0000002986036
Limd1 / Q9QXD8 / LIM domain-containing protein 1 / Q9UGP4* / LIM domains containing 1*ENSMUSG0000002523926
Fblim1 / Q71FD7 / Filamin-binding LIM protein 1 / Q8WUP2*ENSMUSG0000000621924
Ajuba / Q91XC0 / LIM domain-containing protein ajuba / Q96IF1* / ajuba LIM protein*ENSMUSG0000002217824
Wtip / Q7TQJ8 / WT1-interacting protein / A6NIX2*ENSMUSG0000003645923
Ablim1 / Q8K4G5 / actin-binding LIM protein 1 / O14639*ENSMUSG0000002508516
Ablim2 / Q8BL65 / actin-binding LIM protein 2 / Q6H8Q1* / actin binding LIM protein family member 2*ENSMUSG0000002909516
Ablim3 / Q69ZX8 / actin binding LIM protein family, member 3 / O94929*ENSMUSG0000003273515
Dmtn / Q9WV69 / Dematin / Q08495* / dematin actin binding protein*ENSMUSG000000220995


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0030335 positive regulation of cell migration ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005925 focal adhesion ISS
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0045323 interleukin-1 receptor complex ISS
 molecular_functionGO:0005149 interleukin-1 receptor binding ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019900 kinase binding ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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