ENSMUSG00000026258


Mus musculus

Features
Gene ID: ENSMUSG00000026258
  
Biological name :3110079O15Rik
  
Synonyms : 3110079O15Rik / Q9CXL7
  
Possible biological names infered from orthology : Q6UX34 / secondary ossification center associated regulator of chondrocyte maturation / SNORC
  
Species: Mus musculus
  
Chr. number: 1
Strand: 1
Band: D
Gene start: 87470271
Gene end: 87475482
  
Corresponding Affymetrix probe sets: 10348240 (MoGene1.0st)   1453089_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000027476
NCBI entrez gene - 73234     See in Manteia.
MGI - MGI:1920484
RefSeq - XM_006529895
RefSeq - NM_028473
RefSeq Peptide - NP_082749
swissprot - Q9CXL7
swissprot - A0A0A7EP66
Ensembl - ENSMUSG00000026258
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 C9H2ORF82ENSGALG00000040264Gallus gallus
 SNORCENSG00000182600Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR031500  Protein SNORC


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051216 cartilage development IMP
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031012 extracellular matrix IDA
 cellular_componentGO:0071944 cell periphery IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001402 hypoactivity "reduced movement from one place to another" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, J:64289]
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Allelic Composition: Fxnem2Lutzy/Fxnem2.1Lutzy,Tg(Ckmm-cre)5Khn/?
Genetic Background: B6.Cg-Fxnem2Lutzy Fxnem2.1Lutzy Tg(Ckmm-cre)5Khn/J

 MP:0002644 decreased circulating triglyceride level "lower than normal concentration of triacylglycerols in the blood" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
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Allelic Composition: Fxnem2Lutzy/Fxnem2.1Lutzy,Tg(Ckmm-cre)5Khn/?
Genetic Background: B6.Cg-Fxnem2Lutzy Fxnem2.1Lutzy Tg(Ckmm-cre)5Khn/J

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Fxnem2Lutzy/Fxnem2.1Lutzy,Tg(Ckmm-cre)5Khn/?
Genetic Background: B6.Cg-Fxnem2Lutzy Fxnem2.1Lutzy Tg(Ckmm-cre)5Khn/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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