ENSMUSG00000026305


Mus musculus

Features
Gene ID: ENSMUSG00000026305
  
Biological name :Lrrfip1
  
Synonyms : leucine rich repeat (in FLII) interacting protein 1 / Lrrfip1 / Q3UZ39
  
Possible biological names infered from orthology : LRR binding FLII interacting protein 1 / Q32MZ4
  
Species: Mus musculus
  
Chr. number: 1
Strand: 1
Band: D
Gene start: 90998737
Gene end: 91128944
  
Corresponding Affymetrix probe sets: 10348493 (MoGene1.0st)   1433842_at (Mouse Genome 430 2.0 Array)   1437477_at (Mouse Genome 430 2.0 Array)   1448487_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000095255
Ensembl peptide - ENSMUSP00000095254
Ensembl peptide - ENSMUSP00000139497
Ensembl peptide - ENSMUSP00000141024
Ensembl peptide - ENSMUSP00000139902
Ensembl peptide - ENSMUSP00000139811
Ensembl peptide - ENSMUSP00000063878
Ensembl peptide - ENSMUSP00000065850
NCBI entrez gene - 16978     See in Manteia.
MGI - MGI:1342770
RefSeq - XM_017319019
RefSeq - XM_017318961
RefSeq - XM_017318965
RefSeq - XM_017318966
RefSeq - XM_017318969
RefSeq - XM_017318974
RefSeq - XM_017318987
RefSeq - XM_017318996
RefSeq - XM_017318999
RefSeq - XM_017319000
RefSeq - XM_017319004
RefSeq - XM_017319017
RefSeq - NM_001111311
RefSeq - NM_001111312
RefSeq - NM_001310732
RefSeq - NM_008515
RefSeq - XM_006529175
RefSeq - XM_006529176
RefSeq - XM_006529177
RefSeq - XM_006529178
RefSeq - XM_006529180
RefSeq - XM_006529181
RefSeq - XM_006529182
RefSeq - XM_006529187
RefSeq - XM_006529189
RefSeq - XM_006529191
RefSeq - XM_006529194
RefSeq - XM_006529196
RefSeq - XM_006529200
RefSeq - XM_006529204
RefSeq - XM_006529205
RefSeq - XM_006529206
RefSeq - XM_006529208
RefSeq - XM_006529209
RefSeq - XM_006529212
RefSeq - XM_006529213
RefSeq - XM_006529214
RefSeq - XM_006529215
RefSeq - XM_006529216
RefSeq - XM_017318722
RefSeq - XM_017318761
RefSeq - XM_017318813
RefSeq - XM_017318914
RefSeq - XM_017318958
RefSeq - XM_017318960
RefSeq Peptide - NP_001104782
RefSeq Peptide - NP_001297661
RefSeq Peptide - NP_032541
RefSeq Peptide - NP_001104781
swissprot - A0A087WPK3
swissprot - A0A087WNU6
swissprot - E9Q9T1
swissprot - Q3UZ39
swissprot - A0A087WSF5
swissprot - A0A087WPT0
swissprot - G5E8E1
Ensembl - ENSMUSG00000026305
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrfip1aENSDARG00000030012Danio rerio
 lrrfip1bENSDARG00000095170Danio rerio
 ENSGALG00000003862Gallus gallus
 Q32MZ4ENSG00000124831Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lrrfip2 / LRR binding FLII interacting protein 2 / Q9Y608*ENSMUSG0000003249717


Protein motifs (from Interpro)
Interpro ID Name
 IPR019139  Leucine-rich repeat flightless-interacting protein 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISO
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IGI
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0005886 plasma membrane ISO
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0003677 DNA binding ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity ISO
 molecular_functionGO:0045296 cadherin binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr