ENSMUSG00000027270


Mus musculus
membraneLamp5endosomevesiclelysosome-associatedglycoproteincelldendritecytoplasmicrecyclingconservedsitebiologicalprocessplasmaintegralcomponentjunctionsynapticearlygrowthconeendoplasmicreticulum-golgiintermediatecompartmentprojectionsynapsemolecularfunction

Features
Gene ID: ENSMUSG00000027270
  
Biological name :Lamp5
  
Synonyms : Lamp5 / Mus musculus lysosomal-associated membrane protein family, member 5 (Lamp5), transcript variant 2, mRNA. / Q9D387
  
Possible biological names infered from orthology : lysosomal associated membrane protein family member 5 / Q9UJQ1
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: F3
Gene start: 136052239
Gene end: 136069917
  
Corresponding Affymetrix probe sets: 10476482 (MoGene1.0st)   1423853_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000061180
Ensembl peptide - ENSMUSP00000120703
NCBI entrez gene - 76161     See in Manteia.
MGI - MGI:1923411
RefSeq - XM_017319318
RefSeq - NM_001356548
RefSeq - NM_029530
RefSeq - XM_006500364
RefSeq Peptide - NP_083806
RefSeq Peptide - NP_001343477
swissprot - Q9D387
swissprot - A2AT95
Ensembl - ENSMUSG00000027270
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LAMP5ENSGALG00000008918Gallus gallus
 LAMP5ENSG00000125869Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002000  Lysosome-associated membrane glycoprotein
 IPR018134  Lysosome-associated membrane glycoprotein, conserved site


Gene Ontology (GO)
cellorganellemembranecell junctionsynapsecellorganellemembranecell junctionsynapsecellorganellemembranecell junctionsynapsecellorganellemembranecell junctionsynapsecellorganellemembranecell junctionsynapsecellorganellemembranecell junctionsynapsecellorganellemembranecell junctionsynapsecellorganellemembranecell junctionsynapsecellorganellemembranecell junctionsynapsecellorganellemembranecell junctionsynapsecellcellorganelleorganellemembranemembranecell junctioncell junctionsynapsesynapse
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0010008 endosome membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031901 early endosome membrane IEA
 cellular_componentGO:0032584 growth cone membrane IEA
 cellular_componentGO:0032590 dendrite membrane IDA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane ISO
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0055037 recycling endosome IEA
 cellular_componentGO:0055038 recycling endosome membrane IDA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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