ENSMUSG00000027284


Mus musculus

Features
Gene ID: ENSMUSG00000027284
  
Biological name :Cdan1
  
Synonyms : Cdan1 / Codanin-1 / Q8CC12
  
Possible biological names infered from orthology : Q8IWY9
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: E5
Gene start: 120716154
Gene end: 120850128
  
Corresponding Affymetrix probe sets: 10486564 (MoGene1.0st)   10486595 (MoGene1.0st)   1421485_at (Mouse Genome 430 2.0 Array)   1428166_at (Mouse Genome 430 2.0 Array)   1436647_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000106328
Ensembl peptide - ENSMUSP00000106329
NCBI entrez gene - 68968     See in Manteia.
MGI - MGI:1916218
RefSeq - NM_026891
RefSeq Peptide - NP_081167
swissprot - Q8CC12
swissprot - Z4YL55
Ensembl - ENSMUSG00000027284
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdan1ENSDARG00000042261Danio rerio
 CDAN1ENSGALG00000009156Gallus gallus
 CDAN1ENSG00000140326Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR028171  Codanin-1, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006998 nuclear envelope organization TAS
 biological_processGO:0008104 protein localization IEA
 biological_processGO:0008156 negative regulation of DNA replication IEA
 biological_processGO:0031497 chromatin assembly IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0012505 endomembrane system IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Snrpntm2.1Kaj/Snrpn+,Alpltm1(cre)Nagy/Alpl+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0011096 complete embryonic lethality before somite formation "death of all organisms of a given genotype in a population between the point of implantation and somite formation (Mus: E4.5 to less than E8)" [MGI:csmith]
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Allelic Composition: Snrpntm2.1Kaj/Snrpn+,Alpltm1(cre)Nagy/Alpl+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Arf4tm1b(KOMP)Wtsi/Arf4tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Arf4tm1b(KOMP)Wtsi/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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