ENSMUSG00000027828


Mus musculus

Features
Gene ID: ENSMUSG00000027828
  
Biological name :Ssr3
  
Synonyms : Q9DCF9 / signal sequence receptor, gamma / Ssr3
  
Possible biological names infered from orthology : Q9UNL2 / signal sequence receptor subunit 3
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: E1
Gene start: 65379655
Gene end: 65392623
  
Corresponding Affymetrix probe sets: 10498519 (MoGene1.0st)   10338139 (MoGene1.0st)   10338522 (MoGene1.0st)   10339807 (MoGene1.0st)   10339812 (MoGene1.0st)   10340842 (MoGene1.0st)   10340969 (MoGene1.0st)   10342461 (MoGene1.0st)   10342499 (MoGene1.0st)   10342545 (MoGene1.0st)   10344597 (MoGene1.0st)   10340430 (MoGene1.0st)   10341516 (MoGene1.0st)   10342528 (MoGene1.0st)   10343877 (MoGene1.0st)   10344222 (MoGene1.0st)   1415700_a_at (Mouse Genome 430 2.0 Array)   1447053_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000029414
Ensembl peptide - ENSMUSP00000113831
NCBI entrez gene - 67437     See in Manteia.
MGI - MGI:1914687
RefSeq - NM_026155
RefSeq Peptide - NP_080431
swissprot - Q4FK79
swissprot - Q9DCF9
Ensembl - ENSMUSG00000027828
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ssr3ENSDARG00000014165Danio rerio
 SSR3ENSGALG00000028683Gallus gallus
 SSR3ENSG00000114850Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009779  Translocon-associated protein subunit gamma


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001711 abnormal placenta 
Show

Allelic Composition: Plxnb2tm1a(EUCOMM)Wtsi/Plxnb2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6-Plxnb2tm1a(EUCOMM)Wtsi

 MP:0002270 abnormal alveoli morphology "any structural anomaly of the outpouching of the respiratory system where gas exchange occurs" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Plxnb2tm1a(EUCOMM)Wtsi/Plxnb2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6-Plxnb2tm1a(EUCOMM)Wtsi

 MP:0003231 abnormal placental vasculature "malformation in the vessels of the placenta" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:93157]
Show

Allelic Composition: Plxnb2tm1a(EUCOMM)Wtsi/Plxnb2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6-Plxnb2tm1a(EUCOMM)Wtsi

 MP:0004201 fetal growth retardation "slow or limited development during the fetal period (sensu Mus: from E14 through birth)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Plxnb2tm1a(EUCOMM)Wtsi/Plxnb2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6-Plxnb2tm1a(EUCOMM)Wtsi

 MP:0004259 small placenta "reduced size of the size or shape of the organ of metabolic interchange between fetus and mother" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Plxnb2tm1a(EUCOMM)Wtsi/Plxnb2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6-Plxnb2tm1a(EUCOMM)Wtsi

 MP:0004921 decreased placenta weight "reduction in the weight of the organ of metabolic interchange between fetus and mother" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Plxnb2tm1a(EUCOMM)Wtsi/Plxnb2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6-Plxnb2tm1a(EUCOMM)Wtsi

 MP:0008803 abnormal placental labyrinth vasculature morphology "any structural anomaly in blood vessels of the layer of the placenta where embryonic and maternal blood vessels interdigitate" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Plxnb2tm1a(EUCOMM)Wtsi/Plxnb2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6-Plxnb2tm1a(EUCOMM)Wtsi

 MP:0009431 decreased fetal weight "reduced weight of a fetus compared to controls (sensu Mus: from E14 through birth)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Plxnb2tm1a(EUCOMM)Wtsi/Plxnb2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6-Plxnb2tm1a(EUCOMM)Wtsi

 MP:0009658 increased placenta apoptosis "increase in the number of cells of the placenta undergoing programmed cell death" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Plxnb2tm1a(EUCOMM)Wtsi/Plxnb2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6-Plxnb2tm1a(EUCOMM)Wtsi

 MP:0010038 abnormal placenta physiology "any functional anomaly of the organ of metabolic interchange between fetus and mother, which is partly of embryonic origin and partly of maternal origin" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Plxnb2tm1a(EUCOMM)Wtsi/Plxnb2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6-Plxnb2tm1a(EUCOMM)Wtsi

 MP:0011087 complete neonatal lethality "death of all organisms of a given genotype in a population within the neonatal period after birth (Mus: P0)" [MGI:csmith]
Show

Allelic Composition: Plxnb2tm1a(EUCOMM)Wtsi/Plxnb2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6-Plxnb2tm1a(EUCOMM)Wtsi

 MP:0011521 decreased placental labyrinth size "reduction in the size of the structure where embryonic blood vessels are surrounded by trophoblast cells and maternal blood" [MGI:csmith]
Show

Allelic Composition: Plxnb2tm1a(EUCOMM)Wtsi/Plxnb2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6-Plxnb2tm1a(EUCOMM)Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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