ENSMUSG00000028563


Mus musculus

Features
Gene ID: ENSMUSG00000028563
  
Biological name :Tm2d1
  
Synonyms : Q99MB3 / Tm2d1 / TM2 domain-containing protein 1
  
Possible biological names infered from orthology : Q9BX74 / TM2 domain containing 1
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: C6
Gene start: 98355370
Gene end: 98383306
  
Corresponding Affymetrix probe sets: 10514568 (MoGene1.0st)   1426254_at (Mouse Genome 430 2.0 Array)   1451996_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000099855
Ensembl peptide - ENSMUSP00000121468
Ensembl peptide - ENSMUSP00000124188
Ensembl peptide - ENSMUSP00000030292
Ensembl peptide - ENSMUSP00000102666
NCBI entrez gene - 94043     See in Manteia.
MGI - MGI:2137022
RefSeq - XM_006503494
RefSeq - NM_053157
RefSeq Peptide - NP_444387
swissprot - F6R2M8
swissprot - A0A0A0MQC8
swissprot - Q99MB3
swissprot - F6TRH6
Ensembl - ENSMUSG00000028563
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tm2d1ENSDARG00000057042Danio rerio
 TM2D1ENSGALG00000020614Gallus gallus
 TM2D1ENSG00000162604Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tm2d3 / Q8BJ83 / TM2 domain-containing protein 3 / Q9BRN9* / TM2 domain containing 3*ENSMUSG0000007868124


Protein motifs (from Interpro)
Interpro ID Name
 IPR007829  TM2 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0097190 apoptotic signaling pathway IDA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0001540 amyloid-beta binding IDA
 molecular_functionGO:0004930 G-protein coupled receptor activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr