ENSMUSG00000028784


Mus musculus

Features
Gene ID: ENSMUSG00000028784
  
Biological name :Spocd1
  
Synonyms : Spocd1
  
Possible biological names infered from orthology : Q6ZMY3 / SPOC domain containing 1
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: D2.2
Gene start: 129929249
Gene end: 129957115
  
Corresponding Affymetrix probe sets: 10508492 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000081284
Ensembl peptide - ENSMUSP00000118383
NCBI entrez gene - 622480     See in Manteia.
MGI - MGI:3652045
RefSeq - XM_017320505
swissprot - B1ASB6
swissprot - B1ASB5
Ensembl - ENSMUSG00000028784
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6ZMY3ENSG00000134668Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Dido1 / Q8C9B9 / Death-inducer obliterator 1 / Q9BTC0*ENSMUSG0000003891420
Phf3 / PHD finger protein 3 / Q92576*ENSMUSG0000004887419


Protein motifs (from Interpro)
Interpro ID Name
 IPR003618  Transcription elongation factor S-II, central domain
 IPR012921  Spen paralogue and orthologue SPOC, C-terminal
 IPR036575  Transcription elongation factor S-II, central domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0010923 negative regulation of phosphatase activity ISO
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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