ENSMUSG00000031149


Mus musculus

Features
Gene ID: ENSMUSG00000031149
  
Biological name :Praf2
  
Synonyms : PRA1 family protein 2 / Praf2 / Q9JIG8
  
Possible biological names infered from orthology : O60831 / PRA1 domain family member 2
  
Species: Mus musculus
  
Chr. number: X
Strand: 1
Band: A1.1
Gene start: 7728439
Gene end: 7731064
  
Corresponding Affymetrix probe sets: 10598403 (MoGene1.0st)   1416781_at (Mouse Genome 430 2.0 Array)   1416782_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000033489
NCBI entrez gene - 54637     See in Manteia.
MGI - MGI:1859607
RefSeq - NM_138602
RefSeq Peptide - NP_613068
swissprot - Q9JIG8
Ensembl - ENSMUSG00000031149
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 praf2ENSDARG00000032535Danio rerio
 PRAF2ENSG00000243279Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8R5J9 / Arl6ip5 / PRA1 family protein 3 / O75915* / ADP ribosylation factor like GTPase 6 interacting protein 5*ENSMUSG0000003519943


Protein motifs (from Interpro)
Interpro ID Name
 IPR004895  Prenylated rab acceptor PRA1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000480 increased number of ribs "greater than normal numbers of the pairs of bony structures that make up the body wall" [MeSH:National Library of Medicine - Medical Subject Headings, 2003]
Show

Allelic Composition: Pfn1tm1a(EUCOMM)Wtsi/Pfn1+
Genetic Background: B6Brd;B6Dnk;B6N-Tyrc-Brd Pfn1tm1a(EUCOMM)Wtsi/Wtsi

 MP:0003047 abnormal thoracic vertebrae morphology "malformation of any or all of the thirteen bony segments of the spine located anterior to the lumbar vertebrae and posterior to the cervical vertebrae" [MeSH:National Library of Medicine - Medical Subject Headings, 2003, csmith:Cynthia L. Smith, Mouse Genome Informatics Curator]
Show

Allelic Composition: Pfn1tm1a(EUCOMM)Wtsi/Pfn1+
Genetic Background: B6Brd;B6Dnk;B6N-Tyrc-Brd Pfn1tm1a(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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