ENSMUSG00000031917


Mus musculus

Features
Gene ID: ENSMUSG00000031917
  
Biological name :Nip7
  
Synonyms : 60S ribosome subunit biosis / Nip7 / Q9CXK8
  
Possible biological names infered from orthology : NIP7, nucleolar pre-rRNA processing protein / Q9Y221
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: D3
Gene start: 107056877
Gene end: 107060931
  
Corresponding Affymetrix probe sets: 10575144 (MoGene1.0st)   1448480_at (Mouse Genome 430 2.0 Array)   1453324_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000034392
Ensembl peptide - ENSMUSP00000126153
NCBI entrez gene - 66164     See in Manteia.
MGI - MGI:1913414
RefSeq - NM_001164472
RefSeq - NM_025391
RefSeq Peptide - NP_001157944
RefSeq Peptide - NP_079667
swissprot - Q9CXK8
swissprot - E9Q109
Ensembl - ENSMUSG00000031917
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nip7ENSDARG00000059075Danio rerio
 NIP7ENSGALG00000000650Gallus gallus
 NIP7ENSG00000132603Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002478  PUA domain
 IPR005155  Ribosome biogenesis factor NIP7-like
 IPR015947  PUA-like superfamily
 IPR016686  Ribosome biogenesis factor, NIP7
 IPR036974  PUA domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042255 ribosome assembly IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis IBA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0008762 embryonic lethality "death of an animal in the embryonic period (Mus: up to E14)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Btkm2Anu/Btkm2Anu
Genetic Background: C57BL/6NCrlAnu-Btkm2Anu

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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