ENSMUSG00000032582


Mus musculus

Features
Gene ID: ENSMUSG00000032582
  
Biological name :Rbm6
  
Synonyms : Rbm6 / RNA binding motif protein 6
  
Possible biological names infered from orthology : P78332
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: F1
Gene start: 107773559
Gene end: 107873237
  
Corresponding Affymetrix probe sets: 10596796 (MoGene1.0st)   10596810 (MoGene1.0st)   1417213_a_at (Mouse Genome 430 2.0 Array)   1440223_at (Mouse Genome 430 2.0 Array)   1452466_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000141622
Ensembl peptide - ENSMUSP00000138400
Ensembl peptide - ENSMUSP00000141953
Ensembl peptide - ENSMUSP00000142283
Ensembl peptide - ENSMUSP00000035201
Ensembl peptide - ENSMUSP00000138172
Ensembl peptide - ENSMUSP00000138236
NCBI entrez gene - 19654     See in Manteia.
MGI - MGI:1338037
RefSeq - XM_017313217
RefSeq - NM_011251
RefSeq - NM_029169
RefSeq - XM_006511650
RefSeq - XM_006511651
RefSeq - XM_006511653
RefSeq - XM_011242859
RefSeq - XM_011242860
RefSeq - XM_017313216
RefSeq Peptide - NP_035381
RefSeq Peptide - NP_083445
swissprot - A0A0A6YXE2
swissprot - S4R1W5
swissprot - A0A0A6YWN4
swissprot - Q3ULB0
swissprot - S4R1I5
swissprot - S4R1D1
swissprot - A0A0A6YY54
Ensembl - ENSMUSG00000032582
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm6ENSDARG00000077060Danio rerio
 RBM6ENSGALG00000035578Gallus gallus
 RBM6ENSG00000004534Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rbm10 / Q99KG3 / Mus musculus RNA binding motif protein 10 (Rbm10), transcript variant 4, mRNA. / P98175* / RNA binding motif protein 10*ENSMUSG0000003106020
Rbm5 / Q91YE7 / RNA-binding protein 5 / P52756* / RNA binding motif protein 5*ENSMUSG0000003258020


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR000504  RNA recognition motif domain
 IPR013087  Zinc finger C2H2-type
 IPR028806  RNA-binding protein 6
 IPR034123  RBM6, RNA recognition motif 1
 IPR034125  RBM6, RNA recognition motif 2
 IPR035617  RBM6, OCRE domain
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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