ENSMUSG00000032939


Mus musculus

Features
Gene ID: ENSMUSG00000032939
  
Biological name :Nup93
  
Synonyms : Mus musculus nucleoporin 93 (Nup93), transcript variant 4, mRNA. / Nup93 / Q8BJ71
  
Possible biological names infered from orthology : nucleoporin 93 / Q8N1F7
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: C5
Gene start: 94214564
Gene end: 94317227
  
Corresponding Affymetrix probe sets: 10574033 (MoGene1.0st)   1424291_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000078878
Ensembl peptide - ENSMUSP00000148458
Ensembl peptide - ENSMUSP00000148672
Ensembl peptide - ENSMUSP00000148700
Ensembl peptide - ENSMUSP00000105174
NCBI entrez gene - 71805     See in Manteia.
MGI - MGI:1919055
RefSeq - XM_006531376
RefSeq - NM_001357266
RefSeq - NM_001357268
RefSeq - NM_172410
RefSeq - XM_006531374
RefSeq - XM_006531375
RefSeq Peptide - NP_001344197
RefSeq Peptide - NP_765998
RefSeq Peptide - NP_001344195
swissprot - A0A1D5RM86
swissprot - Q8BJ71
swissprot - A0A1D5RLQ0
Ensembl - ENSMUSG00000032939
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nup93ENSDARG00000003487Danio rerio
 NUP93ENSGALG00000003010Gallus gallus
 NUP93ENSG00000102900Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007231  Nucleoporin interacting component Nup93/Nic96
 IPR011990  Tetratricopeptide-like helical domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006913 nucleocytoplasmic transport IEA
 biological_processGO:0006998 nuclear envelope organization ISS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus IBA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0051292 nuclear pore complex assembly IBA
 biological_processGO:0060391 positive regulation of SMAD protein signal transduction IDA
 biological_processGO:0060395 SMAD protein signal transduction IDA
 biological_processGO:0072001 renal system development ISS
 biological_processGO:0072015 glomerular visceral epithelial cell development ISO
 biological_processGO:0090521 glomerular visceral epithelial cell migration ISO
 biological_processGO:1903206 negative regulation of hydrogen peroxide-induced cell death ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope ISS
 cellular_componentGO:0005643 nuclear pore IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031965 nuclear membrane ISS
 cellular_componentGO:0034399 nuclear periphery ISS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0017056 structural constituent of nuclear pore ISS


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
Regulation of HSF1-mediated heat shock response
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
SUMOylation of DNA replication proteins
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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