ENSMUSG00000035963


Mus musculus

Features
Gene ID: ENSMUSG00000035963
  
Biological name :Odf3l2
  
Synonyms : Odf3l2 / Outer dense fiber protein 3-like protein 2 / Q3TZ65
  
Possible biological names infered from orthology : outer dense fiber of sperm tails 3 like 2 / Q3SX64
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: C1
Gene start: 79639526
Gene end: 79645738
  
Corresponding Affymetrix probe sets: 10370603 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000093117
NCBI entrez gene - 382384     See in Manteia.
MGI - MGI:2686003
RefSeq - NM_001033473
RefSeq Peptide - NP_001028645
swissprot - Q3TZ65
Ensembl - ENSMUSG00000035963
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 odf3l2ENSDARG00000021432Danio rerio
 zgc:110183ENSDARG00000014209Danio rerio
 ODF3L2ENSG00000181781Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Odf3 / Q920N1 / Outer dense fiber protein 3 / Q96PU9* / outer dense fiber of sperm tails 3*ENSMUSG0000002548230
Odf3l1 / Q810P2 / Outer dense fiber protein 3-like protein 1 / Q8IXM7* / outer dense fiber of sperm tails 3 like 1*ENSMUSG0000004562030
Odf3b / Q5M8M2 / Outer dense fiber protein 3B / A8MYP8* / outer dense fiber of sperm tails 3B*ENSMUSG0000004739429


Protein motifs (from Interpro)
Interpro ID Name
 IPR010736  Sperm-tail PG-rich repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005881 cytoplasmic microtubule IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001284 absent vibrissae "missing whiskers" [J:18378]
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Allelic Composition: Ltatm1.1(KOMP)Vlcg/Ltatm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Ltatm1.1(KOMP)Vlcg/Ucd

 MP:0001489 decreased startle reflex "greater threshold or less severe reflex response to variable stimuli, often auditory; usually measured by amplitude of whole body flinch" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, What s Wrong With My Mouse?:ISBN 0-471-31639-3]
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Allelic Composition: Izumo1rtm2a(KOMP)Wtsi/Izumo1rtm2a(KOMP)Wtsi
Genetic Background: C57BL/6N-Izumo1rtm2a(KOMP)Wtsi/Wtsi

 MP:0011967 increased or absent threshold for auditory brainstem response "increase in the value at which one or more sound frequencies or broadband clicks first elicits a recordable response generated by electrical activity of neurons in the ascending auditory system, or complete lack of a recordable response at any frequency or broadband click" [MGI:csmith]
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Allelic Composition: Izumo1rtm2a(KOMP)Wtsi/Izumo1rtm2a(KOMP)Wtsi
Genetic Background: C57BL/6N-Izumo1rtm2a(KOMP)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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