ENSMUSG00000036062


Mus musculus

Features
Gene ID: ENSMUSG00000036062
  
Biological name :Phf24
  
Synonyms : Mus musculus PHD finger protein 24 (Phf24), transcript variant 5, mRNA. / Phf24 / Q80TL4
  
Possible biological names infered from orthology : PHD finger protein 24 / Q9UPV7
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: A5
Gene start: 42916660
Gene end: 42944752
  
Corresponding Affymetrix probe sets: 10504206 (MoGene1.0st)   1441610_at (Mouse Genome 430 2.0 Array)   1445465_at (Mouse Genome 430 2.0 Array)   1455023_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000138593
Ensembl peptide - ENSMUSP00000071011
Ensembl peptide - ENSMUSP00000103609
Ensembl peptide - ENSMUSP00000103610
Ensembl peptide - ENSMUSP00000115816
Ensembl peptide - ENSMUSP00000138130
Ensembl peptide - ENSMUSP00000138332
Ensembl peptide - ENSMUSP00000138443
NCBI entrez gene - 230085     See in Manteia.
MGI - MGI:2140712
RefSeq - XM_017320124
RefSeq - NM_001346526
RefSeq - NM_001355693
RefSeq - NM_001355694
RefSeq - NM_001355695
RefSeq - NM_172690
RefSeq - XM_006537809
RefSeq - XM_006537812
RefSeq - XM_006537815
RefSeq - XM_006537817
RefSeq - XM_006537819
RefSeq - XM_006537821
RefSeq - XM_011249992
RefSeq - XM_017320120
RefSeq - XM_017320121
RefSeq - XM_017320122
RefSeq - XM_017320123
RefSeq Peptide - NP_001333455
RefSeq Peptide - NP_001342622
RefSeq Peptide - NP_001342623
RefSeq Peptide - NP_001342624
RefSeq Peptide - NP_766278
swissprot - Q80TL4
swissprot - S4R193
swissprot - S4R1R0
swissprot - S4R202
swissprot - S4R2C8
swissprot - F6SBE4
Ensembl - ENSMUSG00000036062
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 phf24ENSDARG00000077596Danio rerio
 PHF24ENSGALG00000001900Gallus gallus
 PHF24ENSG00000122733Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR011992  EF-hand domain pair
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR031946  KIAA1045, RING finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007214 gamma-aminobutyric acid signaling pathway IMP
 biological_processGO:0008277 regulation of G-protein coupled receptor protein signaling pathway IMP
 biological_processGO:0032228 regulation of synaptic transmission, GABAergic IMP
 biological_processGO:0050966 detection of mechanical stimulus involved in sensory perception of pain IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002734 abnormal mechanical nociception "abnormal capability to sense pain elicited by mechanical stimulation" [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
Show

Allelic Composition: Senp1tm1Wami/Senp1tm1Wami,Tg(Fabp4-cre)#Abel/0
Genetic Background: B6.Cg-Senp1tm1Wami Tg(Fabp4-cre)#Abel

 MP:0002735 abnormal chemical nociception "abnormal capability to sense pain elicited by chemical stimulation" [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
Show

Allelic Composition: Senp1tm1Wami/Senp1tm1Wami,Tg(Fabp4-cre)#Abel/0
Genetic Background: B6.Cg-Senp1tm1Wami Tg(Fabp4-cre)#Abel

 MP:0008874 decreased sensitivity to xenobiotics "increase in the dose or concentration of a foreign compound required to induce a specific level of response" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Senp1tm1Wami/Senp1tm1Wami,Tg(Fabp4-cre)#Abel/0
Genetic Background: B6.Cg-Senp1tm1Wami Tg(Fabp4-cre)#Abel

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Mthfd1tm2b(KOMP)Wtsi/Mthfd1tm2b(KOMP)Wtsi
Genetic Background: C57BL/6N-Mthfd1tm2b(KOMP)Wtsi/Bay

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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