ENSMUSG00000036492


Mus musculus

Features
Gene ID: ENSMUSG00000036492
  
Biological name :Rnf39
  
Synonyms : ring finger protein 39 / Rnf39
  
Possible biological names infered from orthology : Q9H2S5
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: B1
Gene start: 36942918
Gene end: 36947986
  
Corresponding Affymetrix probe sets: 10445061 (MoGene1.0st)   1440912_at (Mouse Genome 430 2.0 Array)   1441793_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000037860
Ensembl peptide - ENSMUSP00000133710
Ensembl peptide - ENSMUSP00000134113
NCBI entrez gene - 386454     See in Manteia.
MGI - MGI:2156378
RefSeq - NM_001099632
RefSeq Peptide - NP_001093102
swissprot - G3UYJ8
swissprot - G3UXJ0
swissprot - A2RT81
Ensembl - ENSMUSG00000036492
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-114c12.5ENSDARG00000092931Danio rerio
 si:ch211-120g10.1ENSDARG00000090930Danio rerio
 si:dkey-18p12.4ENSDARG00000079703Danio rerio
 si:dkey-219e21.2ENSDARG00000096739Danio rerio
 zgc:194990ENSDARG00000069407Danio rerio
 ENSGALG00000037648Gallus gallus
 ENSGALG00000000123Gallus gallus
 ENSGALG00000041207Gallus gallus
 TRIM39.1ENSGALG00000038209Gallus gallus
 RNF39ENSG00000204618Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rfpl4 / Q8VH31 / Ret finger protein-like 4A / A6NLU0* / F8VTS6* / RFPL4A* / RFPL4AL1* / ret finger protein like 4A like 1*ENSMUSG0000003519120


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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