ENSMUSG00000037070


Mus musculus

Features
Gene ID: ENSMUSG00000037070
  
Biological name :Rbmxl1
  
Synonyms : Q91VM5 / Rbmxl1 / RNA binding motif protein, X-linked-like-1
  
Possible biological names infered from orthology : Q96E39
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: C1
Gene start: 78505269
Gene end: 78508898
  
Corresponding Affymetrix probe sets: 10414256 (MoGene1.0st)   10579830 (MoGene1.0st)   10580986 (MoGene1.0st)   1416177_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000048153
Ensembl peptide - ENSMUSP00000147384
NCBI entrez gene - 19656     See in Manteia.
MGI - MGI:1343045
RefSeq - XM_006530776
RefSeq - NM_001252089
RefSeq - NM_009033
RefSeq - XM_006530775
RefSeq Peptide - NP_001345904
RefSeq Peptide - NP_033059
RefSeq Peptide - NP_001239018
RefSeq Peptide - NP_001345903
swissprot - Q91VM5
Ensembl - ENSMUSG00000037070
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbmxENSDARG00000014244Danio rerio
 Q96E39ENSG00000213516Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm7324 / predicted gene 7324 / Q96E39* / RBMXL1* / RNA binding motif protein, X-linked like 1*ENSMUSG0000004923599
Rbmx / Q9WV02 / RNA binding motif protein, X chromosome / P38159* / RNA binding motif protein, X-linked*ENSMUSG0000003113497
Rbmxl2 / Q8N7X1* / O75526* / RBMXL3* / RNA binding motif protein, X-linked like 2* / RNA binding motif protein, X-linked like 3*ENSMUSG0000007389474
Gm10352 / P0C7P1* / P0DJD3* / Q15415* / A6NDE4* / A6NEQ0* / RBMY1B* / RBMY1D* / RBMY1E* / RBMY1F* / RBMY1J* / RBMY1A1* / RNA binding motif protein, Y-linked, family 1, member B* / RNA bindi...ENSMUSG0000009198746
O35698 / Gm21677 / predicted gene, 21677 / Q15415* / A6NDE4* / A6NEQ0* / P0C7P1* / P0DJD3* / RBMY1B* / RBMY1D* / RBMY1E* / RBMY1F* / RBMY1J* / RBMY1A1* / RNA binding motif protein, Y-linked...ENSMUSG0000009391846
O35698 / Gm21704 / predicted gene, 21704 / Q15415* / A6NDE4* / A6NEQ0* / P0C7P1* / P0DJD3* / RBMY1B* / RBMY1D* / RBMY1E* / RBMY1F* / RBMY1J* / RBMY1A1* / RNA binding motif protein, Y-linked...ENSMUSG0000009398746
O35698 / Rbmy1a1 / RNA-binding motif protein, Y chromosome, family 1 member A1 / Q15415* / RBMY1B* / RBMY1D* / RBMY1E* / RBMY1F* / RBMY1J* / A6NDE4* / A6NEQ0* / P0C7P1* / P0DJD3* / RNA bin...ENSMUSG0000009465846
Gm10256 / P0C7P1* / P0DJD3* / Q15415* / A6NDE4* / A6NEQ0* / RBMY1B* / RBMY1D* / RBMY1E* / RBMY1F* / RBMY1J* / RBMY1A1* / RNA binding motif protein, Y-linked, family 1, member B* / RNA bindi...ENSMUSG0000009585246
O35698 / Gm21708 / predicted gene, 21708 / Q15415* / A6NDE4* / A6NEQ0* / P0C7P1* / P0DJD3* / RBMY1B* / RBMY1D* / RBMY1E* / RBMY1F* / RBMY1J* / RBMY1A1* / RNA binding motif protein, Y-linked...ENSMUSG0000009594846
Q60990 / Gm3376 / RNA-binding motif protein, Y chromosome, family 1 member B / Q15415* / RBMY1B* / RBMY1D* / RBMY1E* / RBMY1F* / RBMY1J* / A6NDE4* / A6NEQ0* / P0C7P1* / P0DJD3* / RBMY1A1* ...ENSMUSG0000009652046
Gm4064 / P0C7P1* / P0DJD3* / Q15415* / A6NDE4* / A6NEQ0* / RBMY1B* / RBMY1D* / RBMY1E* / RBMY1F* / RBMY1J* / RBMY1A1* / RNA binding motif protein, Y-linked, family 1, member B* / RNA bindin...ENSMUSG0000010205346
Gm21693 / P0C7P1* / P0DJD3* / Q15415* / A6NDE4* / A6NEQ0* / RBMY1B* / RBMY1D* / RBMY1E* / RBMY1F* / RBMY1J* / RBMY1A1* / RNA binding motif protein, Y-linked, family 1, member B* / RNA bindi...ENSMUSG0000009451145
Cirbp / P60824 / Cold-inducible RNA-binding protein / Q14011*ENSMUSG0000004519323
Tra2b / P62996 / Mus musculus transformer 2 beta (Tra2b), transcript variant 2, mRNA. / P62995* / transformer 2 beta homolog*ENSMUSG0000002285821
Tra2a / transformer 2 alpha / Q13595* / transformer 2 alpha homolog*ENSMUSG0000002981721
Gm29289 / P0C7P1* / P0DJD3* / Q15415* / A6NDE4* / A6NEQ0* / RBMY1B* / RBMY1D* / RBMY1E* / RBMY1F* / RBMY1J* / RBMY1A1* / RNA binding motif protein, Y-linked, family 1, member B* / RNA bindi...ENSMUSG0000010166721
Rbm3 / O89086 / RNA binding motif (RNP1, RRM) protein 3 / P98179* / RNA binding motif protein 3*ENSMUSG0000003116720


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR003954  RNA recognition motif domain, eukaryote
 IPR012604  RBM1CTR
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome ISS
 biological_processGO:0006366 transcription by RNA polymerase II ISS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006509 membrane protein ectodomain proteolysis ISS
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:0048025 negative regulation of mRNA splicing, via spliceosome ISS
 biological_processGO:0048026 positive regulation of mRNA splicing, via spliceosome ISS
 biological_processGO:0051260 protein homooligomerization ISS
 biological_processGO:0071347 cellular response to interleukin-1 ISS
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005719 nuclear euchromatin ISS
 cellular_componentGO:0044530 supraspliceosomal complex ISS
 cellular_componentGO:0070062 extracellular exosome ISS
 cellular_componentGO:0071013 catalytic step 2 spliceosome ISS
 molecular_functionGO:0001047 core promoter binding IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0003723 RNA binding ISS
 molecular_functionGO:0003729 mRNA binding ISS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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