ENSMUSG00000037646


Mus musculus

Features
Gene ID: ENSMUSG00000037646
  
Biological name :Vps13b
  
Synonyms : Q80TY5 / vacuolar protein sorting 13B / Vps13b
  
Possible biological names infered from orthology : Q7Z7G8 / vacuolar protein sorting 13 homolog B
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: B3.1
Gene start: 35371160
Gene end: 35931229
  
Corresponding Affymetrix probe sets: 10423663 (MoGene1.0st)   1430801_at (Mouse Genome 430 2.0 Array)   1434571_at (Mouse Genome 430 2.0 Array)   1444435_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000045490
Ensembl peptide - ENSMUSP00000153856
NCBI entrez gene - 666173     See in Manteia.
MGI - MGI:1916380
RefSeq - XM_006520140
RefSeq - NM_177151
RefSeq - XM_006520138
RefSeq - XM_006520139
RefSeq Peptide - NP_796125
swissprot - Q80TY5
Ensembl - ENSMUSG00000037646
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vps13aENSDARG00000039225Danio rerio
 VPS13BENSGALG00000041179Gallus gallus
 Q7Z7G8ENSG00000132549Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Vps13d / vacuolar protein sorting 13D / Q5THJ4* / vacuolar protein sorting 13 homolog D*ENSMUSG0000002022012
Q8BX70 / Vps13c / vacuolar protein sorting 13C / Q709C8* / vacuolar protein sorting 13 homolog C*ENSMUSG0000003528412
Q5H8C4 / Vps13a / vacuolar protein sorting 13A / Q96RL7* / vacuolar protein sorting 13 homolog A*ENSMUSG0000004623011


Protein motifs (from Interpro)
Interpro ID Name
 IPR009543  Vacuolar protein sorting-associated protein 13, SHR-binding domain
 IPR026854  Vacuolar protein sorting-associated protein 13, N-terminal domain
 IPR031645  Vacuolar protein sorting-associated protein 13, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr