ENSMUSG00000037995


Mus musculus

Features
Gene ID: ENSMUSG00000037995
  
Biological name :Igsf9
  
Synonyms : A / Igsf9 / Q05BQ1
  
Possible biological names infered from orthology : immunoglobulin superfamily member 9 / Q9P2J2
  
Species: Mus musculus
  
Chr. number: 1
Strand: 1
Band: H3
Gene start: 172481788
Gene end: 172498878
  
Corresponding Affymetrix probe sets: 10351801 (MoGene1.0st)   1420518_a_at (Mouse Genome 430 2.0 Array)   1441420_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000116948
Ensembl peptide - ENSMUSP00000142072
Ensembl peptide - ENSMUSP00000123401
Ensembl peptide - ENSMUSP00000117854
Ensembl peptide - ENSMUSP00000058275
Ensembl peptide - ENSMUSP00000106866
NCBI entrez gene - 93842     See in Manteia.
MGI - MGI:2135283
RefSeq - XM_006497056
RefSeq - XM_006497058
RefSeq - XM_006497057
RefSeq - NM_001145800
RefSeq - NM_033608
RefSeq Peptide - NP_001139272
RefSeq Peptide - NP_291086
swissprot - Q05BQ1
swissprot - D3Z7T6
swissprot - A0A0A6YXP1
swissprot - D3YZD2
Ensembl - ENSMUSG00000037995
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 igsf9aENSDARG00000075864Danio rerio
 igsf9bENSDARG00000010408Danio rerio
 IGSF9ENSGALG00000031193Gallus gallus
 IGSF9ENSG00000085552Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
B / E9PZ19 / Igsf9b / Q9UPX0* / immunoglobulin superfamily member 9B*ENSMUSG0000003427539


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR036116  Fibronectin type III superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IDA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0016358 dendrite development IMP
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0050807 regulation of synapse organization IMP
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030424 axon IDA
 cellular_componentGO:0030425 dendrite IMP
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0060077 inhibitory synapse IDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0098632 cell-cell adhesion mediator activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Igf2rtm1Rlj/Igf2r+,Tg(Ckmm-cre)1Lrsn/0
Genetic Background: involves: 129 * C57BL/6J

Allelic Composition: Igsf9tm2Kln/Igsf9tm2Kln
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0002906 susceptibility to pharmacologically induced seizures "inability to withstand doses of pharmacological drugs that induce seizure activity in normal animals" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, J:69504]
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Allelic Composition: Igf2rtm1Rlj/Igf2r+,Tg(Ckmm-cre)1Lrsn/0
Genetic Background: involves: 129 * C57BL/6J

 MP:0009435 abnormal miniature inhibitory postsynaptic currents "defect in the size or duration of spontaneous currents detected in postsynaptic cells that occur in the absence of an inhibitory impulse" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Igf2rtm1Rlj/Igf2r+,Tg(Ckmm-cre)1Lrsn/0
Genetic Background: involves: 129 * C57BL/6J

 MP:0009538 abnormal synapse morphology "any strucutral anomaly of the membrane junction site of a nerve cell to a target cell, such as another nerve cell, an effector cell, or a sensory receptor cell; transmission of nerve impulses may be mediated by chemical or by electrical means" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition", MESH:A08.850]
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Allelic Composition: Igf2rtm1Rlj/Igf2r+,Tg(Ckmm-cre)1Lrsn/0
Genetic Background: involves: 129 * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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