ENSMUSG00000038797


Mus musculus

Features
Gene ID: ENSMUSG00000038797
  
Biological name :Zscan2
  
Synonyms : Q07230 / zinc finger and SCAN domain containing 2 / Zscan2
  
Possible biological names infered from orthology : Q7Z7L9
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: D3
Gene start: 80860920
Gene end: 80876537
  
Corresponding Affymetrix probe sets: 10554471 (MoGene1.0st)   1450514_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000146233
Ensembl peptide - ENSMUSP00000042321
Ensembl peptide - ENSMUSP00000117886
Ensembl peptide - ENSMUSP00000118774
Ensembl peptide - ENSMUSP00000121143
NCBI entrez gene - 22691     See in Manteia.
MGI - MGI:99176
RefSeq - XM_006540812
RefSeq - XM_006540806
RefSeq - XM_006540807
RefSeq - XM_006540808
RefSeq - XM_006540809
RefSeq - XM_006540810
RefSeq - XM_006540811
RefSeq - NM_009553
RefSeq - XM_006540805
RefSeq Peptide - NP_033579
swissprot - D3YYN4
swissprot - D3YW76
swissprot - D3YTK9
swissprot - A0A0U1RQ38
swissprot - Q07230
Ensembl - ENSMUSG00000038797
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX005085.5ENSDARG00000114108Danio rerio
 BX927193.2ENSDARG00000111026Danio rerio
 CR759833.1ENSDARG00000094484Danio rerio
 CZQB01141835.1ENSDARG00000112811Danio rerio
 si:dkey-199m13.7ENSDARG00000111824Danio rerio
 si:dkey-7i4.15ENSDARG00000097551Danio rerio
 znf1017ENSDARG00000114396Danio rerio
 znf1036ENSDARG00000094443Danio rerio
 znf1118ENSDARG00000115524Danio rerio
 znf1134ENSDARG00000097842Danio rerio
 znf979ENSDARG00000109211Danio rerio
 znf980ENSDARG00000116587Danio rerio
 znf985ENSDARG00000091025Danio rerio
 Q7Z7L9ENSG00000176371Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6A085 / Zfp629 / zinc finger protein 629 / Q9UEG4* / ZNF629*ENSMUSG0000004563943
Zfp180 / zinc finger protein 180 / Q9UJW8* / ZNF180*ENSMUSG0000005710138
Zfp46 / Q8BPP0 / zinc finger protein 46 / Q9C0F3* / ZNF436* / zinc finger protein 436*ENSMUSG0000005135137
Zfp37 / P17141 / zinc finger protein 37 / Q9Y6Q3* / ZFP37 zinc finger protein*ENSMUSG0000002838935
Q6GQR8 / Zfp329 / zinc finger protein 329 / Q86UD4* / ZNF329*ENSMUSG0000005789435
Zfp606 / zinc finger protein 606 / Q8WXB4* / ZNF606*ENSMUSG0000003038634
Gm14409ENSMUSG0000007886927
Q8BZ89 / Zfp322a / zinc finger protein 322A / Q6U7Q0* / ZNF322* / zinc finger protein 322*ENSMUSG0000004635126
9130023H24Rik / RIKEN cDNA 9130023H24 geneENSMUSG0000006294423


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002590 increased mean corpuscular volume "greater than the average amount of space occupied by each red blood cell, calculated from the hematocrit and red cell count, in erythrocyte indices" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Sufutm1b(KOMP)Wtsi/Sufutm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Sufutm1b(KOMP)Wtsi/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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