ENSMUSG00000039620


Mus musculus

Features
Gene ID: ENSMUSG00000039620
  
Biological name :6430573F11Rik
  
Synonyms : 6430573F11Rik / Probable tRNA methyltransferase 9-like protein / Q80WQ4
  
Possible biological names infered from orthology : Q9P272 / TRMT9B / tRNA methyltransferase 9B (putative)
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: A4
Gene start: 36457548
Gene end: 36516570
  
Corresponding Affymetrix probe sets: 10571353 (MoGene1.0st)   1443902_at (Mouse Genome 430 2.0 Array)   1456096_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000119288
Ensembl peptide - ENSMUSP00000119912
Ensembl peptide - ENSMUSP00000120524
Ensembl peptide - ENSMUSP00000127875
NCBI entrez gene - 319582     See in Manteia.
MGI - MGI:2442328
RefSeq - XM_006509138
RefSeq - NM_176952
RefSeq - XM_006509133
RefSeq - XM_006509135
RefSeq - XM_006509136
RefSeq Peptide - NP_795926
swissprot - Q80WQ4
swissprot - D3YYA2
Ensembl - ENSMUSG00000039620
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trmt9bENSDARG00000102636Danio rerio
 TRMT9BENSGALG00000042726Gallus gallus
 Q9P272ENSG00000250305Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Alkbh8 / Q80Y20 / Alkylated DNA repair 8 / Q96BT7* / alkB homolog 8, tRNA methyltransferase*ENSMUSG0000002589922


Protein motifs (from Interpro)
Interpro ID Name
 IPR013216  Methyltransferase type 11
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase
 IPR032873  Probable tRNA methyltransferase 9-like protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002098 tRNA wobble uridine modification IBA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000049 tRNA binding IBA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008175 tRNA methyltransferase activity ISO
 molecular_functionGO:0008198 ferrous iron binding IBA
 molecular_functionGO:0016300 tRNA (uracil) methyltransferase activity IBA
 molecular_functionGO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IBA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr