ENSMUSG00000040124


Mus musculus

Features
Gene ID: ENSMUSG00000040124
  
Biological name :Gorab
  
Synonyms : golgin, RAB6-interacting / Gorab / Q8BRM2
  
Possible biological names infered from orthology : Q5T7V8
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: H2.1
Gene start: 163384908
Gene end: 163403669
  
Corresponding Affymetrix probe sets: 10359635 (MoGene1.0st)   1436745_at (Mouse Genome 430 2.0 Array)   1458365_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000036253
Ensembl peptide - ENSMUSP00000140320
NCBI entrez gene - 98376     See in Manteia.
MGI - MGI:2138271
RefSeq - NM_001313738
RefSeq - NM_178883
RefSeq Peptide - NP_001300667
RefSeq Peptide - NP_849214
swissprot - Q8BRM2
swissprot - A0A087WQS3
Ensembl - ENSMUSG00000040124
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gorabENSDARG00000042031Danio rerio
 GORABENSGALG00000003329Gallus gallus
 GORABENSG00000120370Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007033  RAB6-interacting golgin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031069 hair follicle morphogenesis IMP
 biological_processGO:1901622 positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning IMP
 biological_processGO:1905515 non-motile cilium assembly IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000379 reduced hair follicle number "fewer number of the epidermal invaginations from which the hair shaft develops" [J:15108]
Show

Allelic Composition: Syne2cpfl8/Syne2cpfl8
Genetic Background: B6.Cg-Syne2cpfl8

 MP:0000382 underdeveloped hair follicles "arrest of or retarded differentiation of the epidermal invaginations from which the hair shaft develops" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:61790]
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Allelic Composition: Syne2cpfl8/Syne2cpfl8
Genetic Background: B6.Cg-Syne2cpfl8

 MP:0000428 abnormal craniofacial morphology "anomalous structure or development of the face and/or cranium" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Syne2cpfl8/Syne2cpfl8
Genetic Background: B6.Cg-Syne2cpfl8

 MP:0001243 abnormal dermal layer morphology "malformed or atypical condition of the dermal layer of the skin" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:56777]
Show

Allelic Composition: Syne2cpfl8/Syne2cpfl8
Genetic Background: B6.Cg-Syne2cpfl8

 MP:0001505 hunched posture "stooped low with the limbs pulled in close to the body and arched back" [J:67231, J:30404]
Show

Allelic Composition: Syne2cpfl8/Syne2cpfl8
Genetic Background: B6.Cg-Syne2cpfl8

 MP:0001786 skin edema "accumulation of an excessive amount of fluid in the skin" [J:65039]
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Allelic Composition: Syne2cpfl8/Syne2cpfl8
Genetic Background: B6.Cg-Syne2cpfl8

 MP:0001954 respiratory distress "physical difficulty or inability to breathe" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:54931]
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Allelic Composition: Syne2cpfl8/Syne2cpfl8
Genetic Background: B6.Cg-Syne2cpfl8

 MP:0009545 abnormal dermis papillary layer "any structural anomaly of the more superficial, thin layer of the dermis that interdigitates with the epidermis" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Syne2cpfl8/Syne2cpfl8
Genetic Background: B6.Cg-Syne2cpfl8

 MP:0011087 complete neonatal lethality "death of all organisms of a given genotype in a population within the neonatal period after birth (Mus: P0)" [MGI:csmith]
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Allelic Composition: Syne2cpfl8/Syne2cpfl8
Genetic Background: B6.Cg-Syne2cpfl8

 MP:0013205 abnormal nonmotile primary cilium morphology "any structural anomaly of a primary cilium which contains a variable array of axonemal microtubules but does not contain molecular motors; nonmotile primary cilia are found on many different cell types and function as sensory organelles that concentrate and organize sensory signaling molecules" [GO:0031513]
Show

Allelic Composition: Syne2cpfl8/Syne2cpfl8
Genetic Background: B6.Cg-Syne2cpfl8

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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