ENSMUSG00000041697


Mus musculus

Features
Gene ID: ENSMUSG00000041697
  
Biological name :Cox6a1
  
Synonyms : Cox6a1 / cytochrome c oxidase subunit 6A1
  
Possible biological names infered from orthology : P12074
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: F
Gene start: 115345642
Gene end: 115348981
  
Corresponding Affymetrix probe sets: 10532993 (MoGene1.0st)   1417417_a_at (Mouse Genome 430 2.0 Array)   1417418_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000047661
NCBI entrez gene - 12861     See in Manteia.
MGI - MGI:103099
RefSeq - NM_007748
RefSeq Peptide - NP_031774
swissprot - Q9DCW5
Ensembl - ENSMUSG00000041697
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COX6A1ENSGALG00000007205Gallus gallus
 COX6A1ENSG00000111775Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cox6a2 / P43023 / Cytochrome c oxidase subunit 6A2, mitochondrial / Q02221* / cytochrome c oxidase subunit 6A2*ENSMUSG0000003078552


Protein motifs (from Interpro)
Interpro ID Name
 IPR001349  Cytochrome c oxidase, subunit VIa
 IPR018507  Cytochrome c oxidase, subunit VIa, conserved site
 IPR036418  Cytochrome c oxidase, subunit VIa superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0022900 electron transport chain IEA
 biological_processGO:1902600 proton transmembrane transport IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0005751 mitochondrial respiratory chain complex IV IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004129 cytochrome-c oxidase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000609 abnormal liver physiology "aberrant function of this bile-secreting exocrine gland, which is important for detoxification; for fat, carbohydrate, and protein metabolism; and for glycogen storage " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0001405 impaired coordination "reduced ability to execute integrated movements of muscle" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0001516 abnormal motor coordination/ balance "altered ability of an animal to maintain skillful and effective interaction of movements or maintenance of equilibrium" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0002108 abnormal muscle morphology "abnormal development of muscle tissue resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0002269 muscular atrophy "a wasting of muscle tissue resulting in a derangement of the muscle fibers; occurs with age, immobilization, weightlessness, malnutrition or denervation" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, cml:Cathleen M. Lutz , Mouse Genome Informatics Curator]
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Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0002651 abnormal sciatic nerve "malformation, absence or misprojection of the nerve which originates in the lumbar and sacral spinal cord (L4 to S3) and supplies motor and sensory innervation to the lower extremity" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0005403 abnormal nerve conduction "anomaly in the act of transmitting electricity along a single nerve" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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