ENSMUSG00000042178


Mus musculus

Features
Gene ID: ENSMUSG00000042178
  
Biological name :Armc5
  
Synonyms : Armadillo repeat-containing protein 5 / Armc5 / Q5EBP3
  
Possible biological names infered from orthology : armadillo repeat containing 5 / Q96C12
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: F3
Gene start: 128237342
Gene end: 128245100
  
Corresponding Affymetrix probe sets: 10557951 (MoGene1.0st)   1426740_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000040568
NCBI entrez gene - 233912     See in Manteia.
MGI - MGI:2384586
RefSeq - NM_146205
RefSeq - XM_017322219
RefSeq Peptide - NP_666317
swissprot - Q5EBP3
Ensembl - ENSMUSG00000042178
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 armc5ENSDARG00000078083Danio rerio
 ARMC5ENSG00000140691Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR000225  Armadillo
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005925 focal adhesion IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

 MP:0001265 reduced body size "smaller than average body weight, height and/or length of an organism compared to controls" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:23170]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

 MP:0001683 absent mesoderm "missing or failure to differentiate the middle primary germ layer " [J:40594]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

 MP:0001696 failure to gastrulate "inability to differentiate and invaginate the primary germ layers" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:34458]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

 MP:0001745 increased circulating corticosterone level "greater than the normal concentration of this adrenocortical steroid; induces glycogen deposition and regulates sodium conservation and potassium secretion" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:54931]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

 MP:0002665 decreased circulating corticosterone level "less than the normal blood concentration of this adrenocortical steroid; induces glycogen deposition and regulates sodium conservation and potassium secretion" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

 MP:0005129 increased adrenocorticotropin level "increased concentration of adrenocorticotropic hormone " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

 MP:0008288 abnormal adrenal cortex morphology "any structural anomaly of the thick outer layer of the adrenal gland that produces and secretes steroid hormones such as corticosterone, estrone and aldosterone" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition", MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

 MP:0008294 abnormal zona fasciculata morphology "any structural anomaly of the wide middle zone of the adrenal cortex that produces cortisol (hydrocortisone)" [MESH:A06.407.071.140.950]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

 MP:0008302 thin adrenal cortex "reduced thickness of the thick outer layer of the adrenal gland that produces and secretes steroid hormones such as corticosterone, estrone and aldosterone" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

 MP:0011102 partial embryonic lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms within the embryonic period prior to organogenesis (Mus: prior to E14)" [MGI:csmith]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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