ENSMUSG00000042502


Mus musculus
domainmrnasplicingbindingCd2bp2gyfgyf-likesuperfamilyprocessingrnaregulationphosphataseactivityfibrillarcenternucleusnucleoplasmusnrnpcytoplasmcytosolnuclearspeckproteinribonucleoproteincomplex-majorpathway

Features
Gene ID: ENSMUSG00000042502
  
Biological name :Cd2bp2
  
Synonyms : Cd2bp2 / Mus musculus CD2 antigen (cytoplasmic tail) binding protein 2 (Cd2bp2), transcript variant 5, mRNA. / Q9CWK3
  
Possible biological names infered from orthology : CD2 cytoplasmic tail binding protein 2 / O95400
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: F3
Gene start: 127191660
Gene end: 127196050
  
Corresponding Affymetrix probe sets: 10568180 (MoGene1.0st)   1417223_at (Mouse Genome 430 2.0 Array)   1417224_a_at (Mouse Genome 430 2.0 Array)   1448624_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000145634
Ensembl peptide - ENSMUSP00000145779
Ensembl peptide - ENSMUSP00000146167
Ensembl peptide - ENSMUSP00000146087
Ensembl peptide - ENSMUSP00000145888
Ensembl peptide - ENSMUSP00000044790
Ensembl peptide - ENSMUSP00000132963
Ensembl peptide - ENSMUSP00000145549
NCBI entrez gene - 70233     See in Manteia.
MGI - MGI:1917483
RefSeq - XM_006508198
RefSeq - NM_001285905
RefSeq - NM_001285906
RefSeq - NM_001285907
RefSeq - NM_001357817
RefSeq - NM_027353
RefSeq - XM_006508197
RefSeq Peptide - NP_001272835
RefSeq Peptide - NP_001272834
RefSeq Peptide - NP_001272836
RefSeq Peptide - NP_001344746
RefSeq Peptide - NP_081629
swissprot - A0A0U1RNN2
swissprot - A0A0U1RPR4
swissprot - A0A0U1RP07
swissprot - Q9CWK3
swissprot - A0A0U1RNG1
Ensembl - ENSMUSG00000042502
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cd2bp2ENSDARG00000027357Danio rerio
 CD2BP2ENSG00000169217Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003169  GYF domain
 IPR035445  GYF-like domain superfamily


Gene Ontology (GO)
nitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of molecular functionnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of molecular functionnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of molecular functionnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of molecular functionnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of molecular functionnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of molecular functionnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of molecular functionnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of molecular functionnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of molecular functionnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of molecular functionnitrogen compound metabolic nitrogen compound metabolic processcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic organic substance metabolic processregulation of molecular funcregulation of molecular function
protein bindingprotein-containing complex bindingprotein bindingprotein-containing complex bindingprotein bindingprotein-containing complex bindingprotein bindingprotein-containing complex bindingprotein bindingprotein-containing complex bindingprotein bindingprotein-containing complex bindingprotein bindingprotein-containing complex bindingprotein bindingprotein-containing complex bindingprotein bindingprotein-containing complex bindingprotein bindingprotein-containing complex bindingprotein bindingprotein bindingprotein-containing complex bindingprotein-containing complex binding
cellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumenprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0010923 negative regulation of phosphatase activity ISS
 cellular_componentGO:0001650 fibrillar center ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005682 U5 snRNP ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0016607 nuclear speck ISO
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0043021 ribonucleoprotein complex binding ISO


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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