ENSMUSG00000042831


Mus musculus

Features
Gene ID: ENSMUSG00000042831
  
Biological name :Alkbh6
  
Synonyms : Alkbh6 / Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 / Q8K2U2
  
Possible biological names infered from orthology : alkB homolog 6 / Q3KRA9
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: B1
Gene start: 30308717
Gene end: 30314304
  
Corresponding Affymetrix probe sets: 10551865 (MoGene1.0st)   1455390_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000051515
Ensembl peptide - ENSMUSP00000121953
Ensembl peptide - ENSMUSP00000115896
NCBI entrez gene - 233065     See in Manteia.
MGI - MGI:2142037
RefSeq - NM_198027
RefSeq Peptide - NP_932144
swissprot - D6RFR9
swissprot - D3Z1T0
swissprot - Q8K2U2
Ensembl - ENSMUSG00000042831
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 alkbh6ENSDARG00000077253Danio rerio
 BX005407.1ENSDARG00000116148Danio rerio
 ALKBH6ENSG00000239382Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005123  Oxoglutarate/iron-dependent dioxygenase
 IPR027450  Alpha-ketoglutarate-dependent dioxygenase AlkB-like
 IPR032862  Alpha-ketoglutarate-dependent dioxygenase alkB homologue 6
 IPR037151  Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005925 focal adhesion IEA
 molecular_functionGO:0008198 ferrous iron binding IBA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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