ENSMUSG00000043463


Mus musculus

Features
Gene ID: ENSMUSG00000043463
  
Biological name :Rab9b
  
Synonyms : Q8BHH2 / Rab9b / RAB9B, member RAS oncogene family
  
Possible biological names infered from orthology : Q9NP90
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: F1
Gene start: 136858147
Gene end: 136868755
  
Corresponding Affymetrix probe sets: 10606893 (MoGene1.0st)   1433791_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000049739
NCBI entrez gene - 319642     See in Manteia.
MGI - MGI:2442454
RefSeq - NM_176971
RefSeq Peptide - NP_795945
swissprot - Q3KNA5
swissprot - Q8BHH2
Ensembl - ENSMUSG00000043463
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab9bENSDARG00000103391Danio rerio
 RAB9BENSGALG00000004918Gallus gallus
 RAB9BENSG00000123570Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rab9 / Q9R0M6 / RAB9, member RAS oncogene family / RAB9A* / P51151* / RAB9A, member RAS oncogene family*ENSMUSG0000007931676
Rab7 / P51150 / RAB7, member RAS oncogene family / RAB7A* / P51149* / RAB7A, member RAS oncogene family*ENSMUSG0000007947753
Rab7b / Q8VEA8 / RAB7B, member RAS oncogene family / Q96AH8*ENSMUSG0000005268840
Rab23 / RAB23, member RAS oncogene family / Q9ULC3*ENSMUSG0000000476833
Rab32 / Q9CZE3 / RAB32, member RAS oncogene family / Q13637*ENSMUSG0000001983231
Rab38 / Q8QZZ8 / RAB38, member RAS oncogene family / P57729*ENSMUSG0000003055931
Rab29 / RAB29, member RAS oncogene family / O14966*ENSMUSG0000002643330


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030670 phagocytic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0019003 GDP binding IEA
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Retrograde transport at the Trans-Golgi-Network
RAB geranylgeranylation
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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