ENSMUSG00000043716


Mus musculus

Features
Gene ID: ENSMUSG00000043716
  
Biological name :Rpl7
  
Synonyms : P14148 / ribosomal protein L7 / Rpl7
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: A3
Gene start: 16101295
Gene end: 16104662
  
Corresponding Affymetrix probe sets: 10353265 (MoGene1.0st)   10375461 (MoGene1.0st)   10521593 (MoGene1.0st)   10522782 (MoGene1.0st)   1415979_x_at (Mouse Genome 430 2.0 Array)   1426162_a_at (Mouse Genome 430 2.0 Array)   1426163_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000071616
Ensembl peptide - ENSMUSP00000118695
NCBI entrez gene - 19989     See in Manteia.
MGI - MGI:98073
RefSeq - NM_011291
RefSeq Peptide - NP_035421
swissprot - F6XI62
swissprot - P14148
swissprot - Q5M9N8
Ensembl - ENSMUSG00000043716
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl7ENSDARG00000007320Danio rerio
 RPL7ENSGALG00000035252Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9D8M4 / Rpl7l1 / 60S ribosomal protein L7-like 1 / Q6DKI1* / ribosomal protein L7 like 1*ENSMUSG0000006388839


Protein motifs (from Interpro)
Interpro ID Name
 IPR005998  Ribosomal protein L7, eukaryotic
 IPR012988  Ribosomal protein L30, N-terminal
 IPR016082  Ribosomal protein L30, ferredoxin-like fold domain
 IPR018038  Ribosomal protein L30, conserved site
 IPR035808  Ribosomal protein L7, eukaryotic/archaeal
 IPR036919  Ribosomal protein L30, ferredoxin-like fold domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006364 rRNA processing ISO
 biological_processGO:0006412 translation IC
 biological_processGO:0042273 ribosomal large subunit biogenesis ISO
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0005844 polysome IDA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IDA
 molecular_functionGO:0003677 DNA binding ISO
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003729 mRNA binding ISO
 molecular_functionGO:0003735 structural constituent of ribosome IC
 molecular_functionGO:0042803 protein homodimerization activity ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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