ENSMUSG00000043939


Mus musculus

Features
Gene ID: ENSMUSG00000043939
  
Biological name :A530064D06Rik
  
Synonyms : A530064D06Rik / RIKEN cDNA A530064D06 gene
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: C
Gene start: 48151896
Gene end: 48167270
  
Corresponding Affymetrix probe sets: 10451646 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000027764
Ensembl peptide - ENSMUSP00000055935
NCBI entrez gene - 328830     See in Manteia.
MGI - MGI:2443476
RefSeq - NM_178796
RefSeq - NM_001113556
RefSeq Peptide - NP_001107028
RefSeq Peptide - NP_848911
swissprot - Q8BNV8
swissprot - Q8C239
Ensembl - ENSMUSG00000043939
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
B430306N03Rik / RIKEN cDNA B430306N03 geneENSMUSG0000004374053
9830107B12Rik / RIKEN cDNA 9830107B12 geneENSMUSG0000007338645
Q3LRV9 / Treml4 / Trem-like transcript 4 protein / Q6UXN2* / triggering receptor expressed on myeloid cells like 4*ENSMUSG0000005168225


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr