ENSMUSG00000044816


Mus musculus

Features
Gene ID: ENSMUSG00000044816
  
Biological name :D630023F18Rik
  
Synonyms : D630023F18Rik / Q8C3M9 / RIKEN cDNA D630023F18 gene
  
Possible biological names infered from orthology : C2orf80 / chromosome 2 open reading frame 80 / Q0P641
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: C2
Gene start: 65105285
Gene end: 65123214
  
Corresponding Affymetrix probe sets: 10355205 (MoGene1.0st)   1439880_at (Mouse Genome 430 2.0 Array)   1440468_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120090
Ensembl peptide - ENSMUSP00000056196
Ensembl peptide - ENSMUSP00000115574
NCBI entrez gene - 98303     See in Manteia.
MGI - MGI:2138198
RefSeq - NM_001285881
RefSeq - NM_001285882
RefSeq - NM_175293
RefSeq Peptide - NP_780502
RefSeq Peptide - NP_001272810
RefSeq Peptide - NP_001272811
swissprot - Q8C3M9
swissprot - D6RG74
swissprot - D3YUK5
Ensembl - ENSMUSG00000044816
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q0P641ENSG00000188674Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm28845 / Q0P641* / C2orf80* / chromosome 2 open reading frame 80*ENSMUSG0000010084656


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000063 reduced bone density "decreased mineral content of bone; indicator of bone strength" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CLS, J:57315]
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Allelic Composition: Cyp27b1tm1b(EUCOMM)Hmgu/Cyp27b1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Cyp27b1tm1b(EUCOMM)Hmgu/Tcp

 MP:0000219 increased neutrophil count "greater than normal neutrophil numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Cyp27b1tm1b(EUCOMM)Hmgu/Cyp27b1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Cyp27b1tm1b(EUCOMM)Hmgu/Tcp

 MP:0000222 decreased neutrophil count "fewer than normal neutrophil numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Cyp27b1tm1b(EUCOMM)Hmgu/Cyp27b1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Cyp27b1tm1b(EUCOMM)Hmgu/Tcp

 MP:0001325 abnormal retina morphology "structural or developmental anomaly of the thin layer of neural tissue lining the back of the eyeball which contains visual receptors " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Cyp27b1tm1b(EUCOMM)Hmgu/Cyp27b1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Cyp27b1tm1b(EUCOMM)Hmgu/Tcp

 MP:0005103 abnormal retinal pigmentation "anomalous coloring of the thin layer of neural tissue lining the back of the eyeball which contains visual receptors " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Cyp27b1tm1b(EUCOMM)Hmgu/Cyp27b1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Cyp27b1tm1b(EUCOMM)Hmgu/Tcp

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Cyp27b1tm1b(EUCOMM)Hmgu/Cyp27b1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Cyp27b1tm1b(EUCOMM)Hmgu/Tcp

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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