ENSMUSG00000045684


Mus musculus

Features
Gene ID: ENSMUSG00000045684
  
Biological name :Lcn6
  
Synonyms : epididymal-specific lipocalin-6 isoform 1 / Lcn6
  
Possible biological names infered from orthology : AL355987.1 / lipocalin 6 / P62502
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: A3
Gene start: 25676786
Gene end: 25681608
  
Corresponding Affymetrix probe sets: 10470158 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000109835
Ensembl peptide - ENSMUSP00000109837
Ensembl peptide - ENSMUSP00000055660
NCBI entrez gene - 620709     See in Manteia.
MGI - MGI:3045364
RefSeq - XM_006498214
RefSeq - NM_001276448
RefSeq - NM_177840
RefSeq - XM_006498211
RefSeq - XM_006498212
RefSeq - XM_006498213
RefSeq Peptide - NP_808508
RefSeq Peptide - NP_001263377
swissprot - A2AJC1
swissprot - A2AJC0
swissprot - A2AJB9
Ensembl - ENSMUSG00000045684
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AL355987.1ENSG00000204003Homo sapiens
 LCN6ENSG00000267206Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR002345  Lipocalin
 IPR012674  Calycin
 IPR022272  Lipocalin family conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0036094 small molecule binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0004231 abnormal calcium ion homeostasis "anomaly in the processes involved in the maintenance of an internal equilibrium of calcium ions within the body or between a cell and its external environment" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: ApcMin/Apc+,Spata18tm1.2Hifa/Spata18+
Genetic Background: involves: C57BL/6J

 MP:0004543 abnormal sperm physiology "anomaly in the normal function of spermatozoa" [MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
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Allelic Composition: ApcMin/Apc+,Spata18tm1.2Hifa/Spata18+
Genetic Background: involves: C57BL/6J

 MP:0013288 premature acrosome reaction "spontaneous initiation of the cellular exocytosis that allows sperm to penetrate the zona pellucida of ovulated eggs, occurring prior to encountering conditions that induce sperm capacitation" [MGI:smb]
Show

Allelic Composition: ApcMin/Apc+,Spata18tm1.2Hifa/Spata18+
Genetic Background: involves: C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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