ENSMUSG00000046782


Mus musculus

Features
Gene ID: ENSMUSG00000046782
  
Biological name :Ttc6
  
Synonyms : tetratricopeptide repeat domain 6 / Ttc6
  
Possible biological names infered from orthology : Q86TZ1
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: C1
Gene start: 57564113
Gene end: 57737928
  
Corresponding Affymetrix probe sets: 10395869 (MoGene1.0st)   10395875 (MoGene1.0st)   1431730_at (Mouse Genome 430 2.0 Array)   1457349_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000098946
Ensembl peptide - ENSMUSP00000133313
Ensembl peptide - ENSMUSP00000134273
NCBI entrez gene - 70846     See in Manteia.
MGI - MGI:2684915
RefSeq - XM_017315190
RefSeq - XM_017315186
RefSeq - XM_017315187
RefSeq - XM_017315188
RefSeq - XM_017315189
RefSeq - NM_001312644
RefSeq - XM_017315184
RefSeq - XM_017315185
RefSeq Peptide - NP_001299573
swissprot - G3UYY4
swissprot - G3UWJ3
swissprot - Q497K6
Ensembl - ENSMUSG00000046782
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ttc6ENSDARG00000104125Danio rerio
 TTC6ENSGALG00000010137Gallus gallus
 TTC6ENSG00000139865Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ttc13 / tetratricopeptide repeat domain 13 / Q8NBP0*ENSMUSG000000373004


Protein motifs (from Interpro)
Interpro ID Name
 IPR001440  Tetratricopeptide repeat 1
 IPR006597  Sel1-like repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR027363  Methylthioribose-1-phosphate isomerase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr