ENSMUSG00000046798


Mus musculus

Features
Gene ID: ENSMUSG00000046798
  
Biological name :Cldn12
  
Synonyms : Claudin-12 / Cldn12 / Q9ET43
  
Possible biological names infered from orthology : P56749
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: A1
Gene start: 5489537
Gene end: 5514958
  
Corresponding Affymetrix probe sets: 10527965 (MoGene1.0st)   1433781_a_at (Mouse Genome 430 2.0 Array)   1433782_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000122400
Ensembl peptide - ENSMUSP00000111105
Ensembl peptide - ENSMUSP00000111106
Ensembl peptide - ENSMUSP00000061928
Ensembl peptide - ENSMUSP00000136988
NCBI entrez gene - 64945     See in Manteia.
MGI - MGI:1929288
RefSeq - XM_011240674
RefSeq - NM_001193659
RefSeq - NM_001193660
RefSeq - NM_001193661
RefSeq - NM_022890
RefSeq - XM_006503598
RefSeq - XM_011240673
RefSeq Peptide - NP_075028
RefSeq Peptide - NP_001180588
RefSeq Peptide - NP_001180589
RefSeq Peptide - NP_001180590
swissprot - Q9ET43
Ensembl - ENSMUSG00000046798
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cldn12ENSDARG00000003927Danio rerio
 CLDN12ENSGALG00000009038Gallus gallus
 CLDN12ENSG00000157224Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013287  Claudin-12
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016338 calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules ISS
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0005923 bicellular tight junction ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016328 lateral plasma membrane IDA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0071944 cell periphery IDA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0042802 identical protein binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr