ENSMUSG00000048852


Mus musculus

Features
Gene ID: ENSMUSG00000048852
  
Biological name :Gm12185
  
Synonyms : Gm12185
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: B1.2
Gene start: 48904656
Gene end: 48992226
  
Corresponding Affymetrix probe sets: 10385507 (MoGene1.0st)   1425728_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000054351
Ensembl peptide - ENSMUSP00000092049
NCBI entrez gene - 620913     See in Manteia.
MGI - MGI:3652173
RefSeq - NM_001045540
RefSeq Peptide - NP_001039005
swissprot - Q5NCB2
Ensembl - ENSMUSG00000048852
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 irgq2ENSDARG00000068657Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
9930111J21Rik1 / RIKEN cDNA 9930111J21 gene 1ENSMUSG0000006989387
Gm5431ENSMUSG0000005816363
Tgtp2 / Q3T9E4 / Q62293 / T-cell-specific guanine nucleotide triphosphate-binding protein 1 ENSMUSG0000007892132
Tgtp1 / Q3T9E4 / Q62293 / T-cell-specific guanine nucleotide triphosphate-binding protein 1 ENSMUSG0000007892232
9930111J21Rik2 / RIKEN cDNA 9930111J21 gene 2ENSMUSG0000006989227
F830016B08RikENSMUSG0000009094223
Iigp1 / Q9QZ85 / Interferon-inducible GTPase 1 ENSMUSG0000005407222
Gm4841ENSMUSG0000006860622
Ifi47ENSMUSG0000007892021
Gm4951ENSMUSG0000007355520
Irgc1 / Mus musculus immunity-related GTPase family, cinema 1 (Irgc1), transcript variant 1, mRNA. / IRGC* / Q6NXR0* / immunity related GTPase cinema*ENSMUSG0000006202816
Irgm1 / Q60766 / Mus musculus immunity-related GTPase family M member 1 (Irgm1), transcript variant 2, mRNA. / IRGM* / A1A4Y4* / immunity related GTPase M*ENSMUSG0000004687915
Irgm2 / IRGM* / A1A4Y4* / immunity related GTPase M*ENSMUSG0000006987414
Igtp / IRGM* / A1A4Y4* / immunity related GTPase M*ENSMUSG0000007885314


Protein motifs (from Interpro)
Interpro ID Name
 IPR007743  Immunity-related GTPases-like
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030385  IRG-type guanine nucleotide-binding (G) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006952 defense response IBA
 biological_processGO:0035458 cellular response to interferon-beta IBA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003924 GTPase activity IBA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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