ENSMUSG00000049164


Mus musculus

Features
Gene ID: ENSMUSG00000049164
  
Biological name :Zfp518a
  
Synonyms : B2RRF6 / Zfp518a / zinc finger protein 518A
  
Possible biological names infered from orthology : Q6AHZ1 / ZNF518A
  
Species: Mus musculus
  
Chr. number: 19
Strand: 1
Band: C3
Gene start: 40894705
Gene end: 40917947
  
Corresponding Affymetrix probe sets: 10463121 (MoGene1.0st)   1428629_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000055956
NCBI entrez gene - 72672     See in Manteia.
MGI - MGI:1919922
RefSeq - XM_011247364
RefSeq - NM_028319
RefSeq - XM_011247361
RefSeq - XM_011247363
RefSeq - XM_006527368
RefSeq - XM_011247359
RefSeq - XM_011247360
RefSeq Peptide - NP_082595
swissprot - B2RRF6
Ensembl - ENSMUSG00000049164
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-214e3.5ENSDARG00000074270Danio rerio
 ZNF518AENSGALG00000006966Gallus gallus
 Q6AHZ1ENSG00000177853Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zfp518b / zinc finger protein 518B / Q9C0D4* / ZNF518B*ENSMUSG0000004657214


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR027760  Zinc finger protein 518
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr