ENSMUSG00000049191


Mus musculus

Features
Gene ID: ENSMUSG00000049191
  
Biological name :Rtl5
  
Synonyms : Q5DTT4 / retrotransposon Gag like 5 / Rtl5
  
Possible biological names infered from orthology : Q5HYW3
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: D
Gene start: 102066544
Gene end: 102071304
  
Corresponding Affymetrix probe sets: 10606064 (MoGene1.0st)   1435419_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000109261
Ensembl peptide - ENSMUSP00000133001
Ensembl peptide - ENSMUSP00000139504
NCBI entrez gene - 331474     See in Manteia.
MGI - MGI:3045324
RefSeq - XM_006528101
RefSeq - NM_001278534
RefSeq Peptide - NP_001265463
swissprot - Q5DTT4
swissprot - Q8C065
Ensembl - ENSMUSG00000049191
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RTL5ENSG00000242732Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rtl6 / Q505G4 / Retrotransposon Gag-like protein 6 / Q6ICC9* / retrotransposon Gag like 6*ENSMUSG0000005574512
Ldoc1 / Q7TPY9 / Protein LDOC1 / O95751* / LDOC1, regulator of NFKB signaling*ENSMUSG000000576157
Rtl8c / retrotransposon Gag like 8C / A6ZKI3*ENSMUSG000000518515
Rtl8b / retrotransposon Gag like 8B / RTL8C* / A6ZKI3* / retrotransposon Gag like 8C*ENSMUSG000000679244
Rtl8a / retrotransposon Gag like 8A / RTL8C* / A6ZKI3* / retrotransposon Gag like 8C*ENSMUSG000000679254


Protein motifs (from Interpro)
Interpro ID Name
 IPR032549  Domain of unknown function DUF4939
 IPR032567  LDOC1-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr