ENSMUSG00000050379


Mus musculus

Features
Gene ID: ENSMUSG00000050379
  
Biological name :Sept6
  
Synonyms : Q9R1T4 / Sept6 / Septin-6
  
Possible biological names infered from orthology : Q14141
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: A3.3
Gene start: 36911326
Gene end: 36991794
  
Corresponding Affymetrix probe sets: 10604057 (MoGene1.0st)   1420876_a_at (Mouse Genome 430 2.0 Array)   1420877_at (Mouse Genome 430 2.0 Array)   1424181_at (Mouse Genome 430 2.0 Array)   1431973_at (Mouse Genome 430 2.0 Array)   1436819_at (Mouse Genome 430 2.0 Array)   1440939_at (Mouse Genome 430 2.0 Array)   1460286_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000054034
Ensembl peptide - ENSMUSP00000062014
Ensembl peptide - ENSMUSP00000110894
Ensembl peptide - ENSMUSP00000116670
NCBI entrez gene - 56526     See in Manteia.
MGI - MGI:1888939
RefSeq - XM_017318581
RefSeq - NM_001177323
RefSeq - NM_001177324
RefSeq - NM_001253706
RefSeq - NM_019942
RefSeq - XM_006541388
RefSeq - XM_006541389
RefSeq - XM_006541390
RefSeq - XM_006541391
RefSeq - XM_017318580
RefSeq Peptide - NP_001170795
RefSeq Peptide - NP_001346069
RefSeq Peptide - NP_064326
RefSeq Peptide - NP_001170794
RefSeq Peptide - NP_001240635
swissprot - A2A3W1
swissprot - Q9R1T4
Ensembl - ENSMUSG00000050379
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sept6ENSDARG00000010721Danio rerio
 SEPT6ENSGALG00000008633Gallus gallus
 SEPT6ENSG00000125354Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8C1B7 / Sept11 / septin 11 / Q9NVA2*ENSMUSG0000005801382
Sept8 / Q8CHH9 / Mus musculus septin 8 (Sept8), transcript variant 4, mRNA. / Q92599* / septin 8*ENSMUSG0000001839876
Sept10 / septin 10 / Q9P0V9*ENSMUSG0000001991768
Q9DA97 / Sept14 / Septin-14 / Q6ZU15*ENSMUSG0000003421956


Protein motifs (from Interpro)
Interpro ID Name
 IPR016491  Septin
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030379  Septin-type guanine nucleotide-binding (G) domain
 IPR030644  Septin 6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0051301 cell division IEA
 cellular_componentGO:0000775 chromosome, centromeric region IEA
 cellular_componentGO:0000776 kinetochore IEA
 cellular_componentGO:0000777 condensed chromosome kinetochore IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005940 septin ring IDA
 cellular_componentGO:0008021 synaptic vesicle IDA
 cellular_componentGO:0030496 midbody IEA
 cellular_componentGO:0031105 septin complex ISO
 cellular_componentGO:0032154 cleavage furrow IDA
 cellular_componentGO:0032173 septin collar IDA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043679 axon terminus IDA
 cellular_componentGO:0097227 sperm annulus ISO
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Lhfpl5hscy-2J/Lhfpl5hscy-2J
Genetic Background: C57BL/6J-Lhfpl5hscy-2J/J

Allelic Composition: Sept6tm1Nosa/Sept6tm1Nosa
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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