ENSMUSG00000050530


Mus musculus

Features
Gene ID: ENSMUSG00000050530
  
Biological name :Fam171a1
  
Synonyms : Fam171a1 / Mus musculus family with sequence similarity 171, member A1 (Fam171a1), transcript variant 3, mRNA.
  
Possible biological names infered from orthology : family with sequence similarity 171 member A1 / Q5VUB5
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: A1
Gene start: 3114224
Gene end: 3227806
  
Corresponding Affymetrix probe sets: 10468916 (MoGene1.0st)   1438402_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000053619
Ensembl peptide - ENSMUSP00000110751
Ensembl peptide - ENSMUSP00000089086
Ensembl peptide - ENSMUSP00000072724
NCBI entrez gene - 269233     See in Manteia.
MGI - MGI:2442917
RefSeq - XM_017318678
RefSeq - NM_001081161
RefSeq - NM_001310434
RefSeq - NM_001347067
RefSeq - XM_006497478
RefSeq - XM_006497479
RefSeq Peptide - NP_001074630
RefSeq Peptide - NP_001297363
RefSeq Peptide - NP_001333996
swissprot - A2ATK8
swissprot - A2ATK9
swissprot - A2ATL0
swissprot - A2ATL1
Ensembl - ENSMUSG00000050530
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fam171a1ENSDARG00000079788Danio rerio
 FAM171A1ENSGALG00000008764Gallus gallus
 Q5VUB5ENSG00000148468Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A2A699 / Fam171a2 / Protein FAM171A2 / A8MVW0* / family with sequence similarity 171 member A2*ENSMUSG0000003468536
Q14CH0 / Fam171b / Protein FAM171B / Q6P995* / family with sequence similarity 171 member B*ENSMUSG0000004838828


Protein motifs (from Interpro)
Interpro ID Name
 IPR013783  Immunoglobulin-like fold
 IPR018890  Uncharacterised protein family FAM171


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr