ENSMUSG00000051169


Mus musculus

Features
Gene ID: ENSMUSG00000051169
  
Biological name :Rpusd3
  
Synonyms : Q14AI6 / RNA pseudouridylate synthase domain containing 3 / Rpusd3
  
Possible biological names infered from orthology : Q6P087
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: E3
Gene start: 113415319
Gene end: 113419340
  
Corresponding Affymetrix probe sets: 10546919 (MoGene1.0st)   1434626_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120250
Ensembl peptide - ENSMUSP00000115950
Ensembl peptide - ENSMUSP00000120380
Ensembl peptide - ENSMUSP00000059057
Ensembl peptide - ENSMUSP00000108715
Ensembl peptide - ENSMUSP00000114511
NCBI entrez gene - 101122     See in Manteia.
MGI - MGI:2141440
RefSeq - XM_006505227
RefSeq - NM_001033204
RefSeq - NM_001346511
RefSeq Peptide - NP_001028376
RefSeq Peptide - NP_001333440
swissprot - B7ZMQ0
swissprot - D3YVC8
swissprot - F6WLR1
swissprot - F6UDW0
swissprot - Q14AI6
Ensembl - ENSMUSG00000051169
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6DBR0ENSDARG00000012674Danio rerio
 Q6P087ENSG00000156990Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9CWX4 / Rpusd4 / Mitochondrial RNA pseudouridine synthase Rpusd4 / Q96CM3* / RNA pseudouridylate synthase domain containing 4*ENSMUSG0000003204428


Protein motifs (from Interpro)
Interpro ID Name
 IPR006145  Pseudouridine synthase, RsuA/RluB/C/D/E/F
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IEA
 molecular_functionGO:0016853 isomerase activity IEA
 molecular_functionGO:0019239 deaminase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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