ENSMUSG00000054679


Mus musculus

Features
Gene ID: ENSMUSG00000054679
  
Biological name :Srsf12
  
Synonyms : Q8C8K3 / Serine/arginine-rich splicing factor 12 / Srsf12
  
Possible biological names infered from orthology : Q8WXF0 / serine and arginine rich splicing factor 12
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: A5
Gene start: 33208991
Gene end: 33233340
  
Corresponding Affymetrix probe sets: 10503876 (MoGene1.0st)   1437168_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000067939
Ensembl peptide - ENSMUSP00000103794
NCBI entrez gene - 272009     See in Manteia.
MGI - MGI:2661424
RefSeq - XM_017320249
RefSeq - NM_177774
RefSeq - XM_006537958
RefSeq - XM_006537959
RefSeq Peptide - NP_808442
swissprot - A3KG57
swissprot - Q8C8K3
Ensembl - ENSMUSG00000054679
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8WXF0ENSG00000154548Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9R0U0 / Srsf10 / serine/arginine-rich splicing factor 10 / O75494* / serine and arginine rich splicing factor 10*ENSMUSG0000002867624
Srsf2 / Q62093 / Serine/arginine-rich splicing factor 2 / Q01130* / serine and arginine rich splicing factor 2*ENSMUSG0000003412020
4930595M18Rik / RIKEN cDNA 4930595M18 geneENSMUSG0000006067312


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034477  Serine/arginine-rich splicing factor 12
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IEA
 biological_processGO:0000395 mRNA 5"-splice site recognition IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr