ENSMUSG00000055214


Mus musculus

Features
Gene ID: ENSMUSG00000055214
  
Biological name :Pld5
  
Synonyms : Mus musculus phospholipase D family, member 5 (Pld5), transcript variant 3, mRNA. / Pld5 / Q3UNN8
  
Possible biological names infered from orthology : phospholipase D family member 5 / Q8N7P1
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: H4
Gene start: 175962306
Gene end: 176275312
  
Corresponding Affymetrix probe sets: 10360463 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000106797
Ensembl peptide - ENSMUSP00000121428
Ensembl peptide - ENSMUSP00000069326
Ensembl peptide - ENSMUSP00000106796
NCBI entrez gene - 319455     See in Manteia.
MGI - MGI:2442056
RefSeq - XM_017321175
RefSeq - XM_006496897
RefSeq - XM_006496898
RefSeq - XM_006496900
RefSeq - XM_011238826
RefSeq - XM_011238827
RefSeq - XM_011238828
RefSeq - XM_011238829
RefSeq - XM_017321154
RefSeq - NM_001195816
RefSeq - NM_001357844
RefSeq - NM_001357846
RefSeq - NM_176916
RefSeq Peptide - NP_001344775
RefSeq Peptide - NP_795890
RefSeq Peptide - NP_001182745
RefSeq Peptide - NP_001344773
swissprot - Q3UNN8
swissprot - D3YZ01
swissprot - D6RCJ9
swissprot - D3YYN6
Ensembl - ENSMUSG00000055214
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-194e18.2ENSDARG00000063257Danio rerio
 PLD5ENSGALG00000010737Gallus gallus
 PLD5ENSG00000180287Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pld3 / O35405 / Phospholipase D3 / Q8IV08* / phospholipase D family member 3*ENSMUSG0000000336330
Pld4 / Q8BG07 / Phospholipase D4 / Q96BZ4* / phospholipase D family member 4*ENSMUSG0000005216028


Protein motifs (from Interpro)
Interpro ID Name
 IPR001736  Phospholipase D/Transphosphatidylase
 IPR032803  PLD-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003824 catalytic activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000063 reduced bone density "decreased mineral content of bone; indicator of bone strength" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CLS, J:57315]
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Allelic Composition: Pdgfrbtm1b(EUCOMM)Hmgu/Pdgfrb+
Genetic Background: C57BL/6N-Pdgfrbtm1b(EUCOMM)Hmgu/H

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Ctnnb1tm1Mmt/Ctnnb1tm1Mmt,Krastm4Tyj/Kras+,Tg(Upk2-cre)6Xrw/0
Genetic Background: involves: 129S4/SvJae * 129X1/SvJ * FVB/N

 MP:0003961 decreased lean body mass "less than average fat-free physical bulk or volume of the body including all its components except adipose tissue" [honda:Hiraoki Onda, Mouse GEnome Informatics Curator]
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Allelic Composition: Pdgfrbtm1b(EUCOMM)Hmgu/Pdgfrb+
Genetic Background: C57BL/6N-Pdgfrbtm1b(EUCOMM)Hmgu/H

 MP:0004599 abnormal vertebral arch morphology "any structural anomaly of the dorsal part of a vertebra, consisting of a pair of pedicles, a pair of laminae, and seven processes (four articular processes, two transverse processes, and one spinous process)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Pdgfrbtm1b(EUCOMM)Hmgu/Pdgfrb+
Genetic Background: C57BL/6N-Pdgfrbtm1b(EUCOMM)Hmgu/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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