ENSMUSG00000055960


Mus musculus

Features
Gene ID: ENSMUSG00000055960
  
Biological name :Skint4
  
Synonyms : A7TZF3 / Mus musculus selection and upkeep of intraepithelial T cells 4 (Skint4), transcript variant 2, mRNA. / Skint4
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: D1
Gene start: 112072016
Gene end: 112168076
  
Corresponding Affymetrix probe sets: 10507062 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000102175
Ensembl peptide - ENSMUSP00000102176
Ensembl peptide - ENSMUSP00000070676
Ensembl peptide - ENSMUSP00000102174
NCBI entrez gene - 320640     See in Manteia.
MGI - MGI:2444425
RefSeq - XM_006503165
RefSeq - XM_011240554
RefSeq - NM_001347180
RefSeq - NM_178786
RefSeq Peptide - NP_001334109
RefSeq Peptide - NP_848901
swissprot - E9QLU2
swissprot - A7TZF3
Ensembl - ENSMUSG00000055960
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BTN1A1ENSGALG00000000589Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A7TZF0 / Skint3 / Selection and upkeep of intraepithelial T-cells protein 3 ENSMUSG0000007086856
Skint5 / selection and upkeep of intraepithelial T-cells protein 5 isoform 1 ENSMUSG0000007859854
A7XUX6 / Skint2 / selection and upkeep of intraepithelial T cells 2ENSMUSG0000003435953
A7XUZ6 / Skint6 / Selection and upkeep of intraepithelial T-cells protein 6 ENSMUSG0000008719452
A7TZE6 / Skint1 / Selection and upkeep of intraepithelial T-cells protein 1 ENSMUSG0000008977341
A7XV04 / Skint7 / Selection and upkeep of intraepithelial T-cells protein 7 ENSMUSG0000004921424
A7XV07 / Skint8 / Selection and upkeep of intraepithelial T-cells protein 8 ENSMUSG0000007859924
Btnl6 / butyrophilin-like 6ENSMUSG0000009261822
Btn1a1 / Q62556 / Butyrophilin subfamily 1 member A1 / Q13410*ENSMUSG0000000070621
A4QPC6 / Btn2a2 / Butyrophilin subfamily 2 member A2 / BTN2A1* / Q7KYR7* / Q8WVV5* / butyrophilin subfamily 2 member A1*ENSMUSG0000005321621
Btnl4 / butyrophilin-like 4ENSMUSG0000005843521
Btnl9 / Q8BJE2 / Butyrophilin-like protein 9 / Q6UXG8* / butyrophilin like 9*ENSMUSG0000004028320
Btnl1 / Q7TST0 / Butyrophilin-like protein 1 ENSMUSG0000006263820
Btnl2 / O70355 / Butyrophilin-like protein 2 / Q9UIR0* / butyrophilin like 2*ENSMUSG0000002434018
Ermap / erythroblast membrane associated protein (Scianna blood group) / Q96PL5*ENSMUSG0000002864418
Btnl10 / Q9JK39 / Butyrophilin-like protein 10 ENSMUSG0000002049015


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr