ENSMUSG00000057375


Mus musculus

Features
Gene ID: ENSMUSG00000057375
  
Biological name :Yipf1
  
Synonyms : Q91VU1 / Yip1 domain family, member 1 / Yipf1
  
Possible biological names infered from orthology : Q9Y548
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: C7
Gene start: 107314363
Gene end: 107359823
  
Corresponding Affymetrix probe sets: 10506668 (MoGene1.0st)   1424196_at (Mouse Genome 430 2.0 Array)   1442647_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000075113
Ensembl peptide - ENSMUSP00000119107
Ensembl peptide - ENSMUSP00000115626
Ensembl peptide - ENSMUSP00000114898
NCBI entrez gene - 230584     See in Manteia.
MGI - MGI:1915532
RefSeq - XM_006502968
RefSeq - NM_001205156
RefSeq - NM_145550
RefSeq Peptide - NP_001192085
RefSeq Peptide - NP_663525
swissprot - Q91VU1
swissprot - D3Z2S7
swissprot - A2A8S2
swissprot - A2A8S3
Ensembl - ENSMUSG00000057375
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 yipf1ENSDARG00000014474Danio rerio
 YIPF1ENSGALG00000010740Gallus gallus
 YIPF1ENSG00000058799Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Yipf2 / Q99LP8 / Yip1 domain family, member 2 / Q9BWQ6*ENSMUSG0000003218249


Protein motifs (from Interpro)
Interpro ID Name
 IPR006977  Yip1 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0000138 Golgi trans cisterna IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005794 Golgi apparatus IBA
 cellular_componentGO:0005797 Golgi medial cisterna IEA
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030133 transport vesicle IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001391 abnormal tail movements "a change from the normal manner of moving the tail" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Xbp1tm1a(EUCOMM)Wtsi/Xbp1+
Genetic Background: C57BL/6N-Xbp1tm1a(EUCOMM)Wtsi/Ics

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Sirt2tm1a(EUCOMM)Wtsi/Sirt2tm1a(EUCOMM)Wtsi
Genetic Background: involves: C57BL/6 * C57BL/6N

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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