ENSMUSG00000059920


Mus musculus

Features
Gene ID: ENSMUSG00000059920
  
Biological name :4930453N24Rik
  
Synonyms : 4930453N24Rik / Q3TTL0
  
Possible biological names infered from orthology : C3orf38 / chromosome 3 open reading frame 38 / Q5JPI3
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: C1.3
Gene start: 64751751
Gene end: 64771161
  
Corresponding Affymetrix probe sets: 10440284 (MoGene1.0st)   1423976_at (Mouse Genome 430 2.0 Array)   1423977_at (Mouse Genome 430 2.0 Array)   1438553_x_at (Mouse Genome 430 2.0 Array)   1449718_s_at (Mouse Genome 430 2.0 Array)   1449719_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000076255
NCBI entrez gene - 67609     See in Manteia.
MGI - MGI:1914859
RefSeq - NM_026273
RefSeq - XM_006522489
RefSeq Peptide - NP_080549
swissprot - Q3TTL0
Ensembl - ENSMUSG00000059920
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-261p9.4ENSDARG00000076798Danio rerio
 C3orf38ENSGALG00000015402Gallus gallus
 Q5JPI3ENSG00000179021Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026698  Uncharacterised protein C3orf38 (DUF4518)
 IPR032710  NTF2-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0043065 positive regulation of apoptotic process IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000018 small ears "outer ears of a smaller than normal size" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Prnp/Prndtm1Aag/Prnp/Prndtm1Aag
Genetic Background: Not Specified

 MP:0000120 malocclusion "perturbations in the normal patterned arrangement of the teeth or alignment of the jaw, resulting in the incorrect position of biting or chewing surfaces of the upper and lower teeth" [J:61509]
Show

Allelic Composition: Prnp/Prndtm1Aag/Prnp/Prndtm1Aag
Genetic Background: Not Specified

 MP:0000121 failure of tooth eruption "inability of the teeth to grow into the oral cavity" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:61295]
Show

Allelic Composition: Prnp/Prndtm1Aag/Prnp/Prndtm1Aag
Genetic Background: Not Specified

 MP:0000372 irregular coat pigmentation "uneven coloration of the hair" [J:65030]
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Allelic Composition: Prnp/Prndtm1Aag/Prnp/Prndtm1Aag
Genetic Background: Not Specified

 MP:0001732 postnatal growth retardation "slow or limited development after birth " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Prnp/Prndtm1Aag/Prnp/Prndtm1Aag
Genetic Background: Not Specified

 MP:0002075 abnormal coat color "irregular or unusual pigmentation pattern of the hair in relation to control animals" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Prnp/Prndtm1Aag/Prnp/Prndtm1Aag
Genetic Background: Not Specified

 MP:0002083 premature death "death after 3 weeks of age, but before normal life span" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Prnp/Prndtm1Aag/Prnp/Prndtm1Aag
Genetic Background: Not Specified

 MP:0002818 abnormal dentin morphology "defects in the hard portion of the tooth surrounding the pulp, covered by enamel on the crown and cementum on the root" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Prnp/Prndtm1Aag/Prnp/Prndtm1Aag
Genetic Background: Not Specified

 MP:0005358 abnormal incisor morphology "structural defect of the long pointed teeth; most anterior and prominent in the jaw" [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator, J:85574]
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Allelic Composition: Prnp/Prndtm1Aag/Prnp/Prndtm1Aag
Genetic Background: Not Specified

 MP:0030542 abnormal dentin development "any anomaly in the process whose specific outcome is the formation of dentin, the hard portion of the tooth surrounding the pulp, covered by enamel on the crown and cementum on the root; dentinogenesis begins prior to enamel formation and is initiated by the odontoblasts of the dental pulp; dentin is derived from the dental papilla of the tooth germ; after apposition of predentin and maturation into dentin, the cell bodies of the odontoblasts remain in the pulp inside the tooth, along its outer wall; unlike enamel, dentin continues to form throughout life and can be initiated in response to stimuli, such as tooth decay or attrition" [GO:0097187, https://en.wikipedia.org/wiki/Dentin]
Show

Allelic Composition: Prnp/Prndtm1Aag/Prnp/Prndtm1Aag
Genetic Background: Not Specified

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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