ENSMUSG00000064016


Mus musculus

Features
Gene ID: ENSMUSG00000064016
  
Biological name :Gm648
  
Synonyms : Gm648
  
Possible biological names infered from orthology : cancer/testis antigen family 45 member A1 / cancer/testis antigen family 45 member A10 / cancer/testis antigen family 45 member A2 / cancer/testis antigen family 45 member A3 / cancer/testis antigen family 45 member A5 / cancer/testis antigen family 45 member A6 / cancer/testis antigen family 45 member A7 / cancer/testis antigen family 45 member A8 / cancer/testis antigen family 45 member A9 / CT45A1 / CT45A10 / CT45A2 / CT45A3 / CT45A5 / CT45A6 / CT45A7 / CT45A8 / CT45A9 / P0DMU7 / P0DMU8 / P0DMU9 / P0DMV0 / P0DMV1 / P0DMV2 / Q5DJT8 / Q5HYN5 / Q8NHU0 / Q9NXZ1 / SAGE1 / sarcoma antigen 1
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: A6
Gene start: 56543874
Gene end: 56549606
  
Corresponding Affymetrix probe sets: 10604682 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000079908
NCBI entrez gene - 270599     See in Manteia.
MGI - MGI:2685494
RefSeq - XM_011247599
RefSeq - NM_001033372
RefSeq - XM_006528047
RefSeq - XM_011247598
RefSeq - XM_006528046
RefSeq Peptide - NP_001028544
swissprot - Q3UJ22
Ensembl - ENSMUSG00000064016
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000006157Gallus gallus
 CT45A1ENSG00000268940Homo sapiens
 CT45A2ENSG00000271449Homo sapiens
 CT45A3ENSG00000269096Homo sapiens
 CT45A5ENSG00000228836Homo sapiens
 CT45A6ENSG00000278289Homo sapiens
 CT45A7ENSG00000273696Homo sapiens
 CT45A8ENSG00000278085Homo sapiens
 CT45A9ENSG00000270946Homo sapiens
 P0DMU9ENSG00000269586Homo sapiens
 SAGE1ENSG00000181433Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ints6l / Q8BND4 / Integrator complex subunit 6-like ENSMUSG0000003596736
Ints6 / Q6PCM2 / Integrator complex subunit 6 / Q9UL03*ENSMUSG0000003516129
Gm10477 / SAGE1* / Q5HYN5* / Q5DJT8* / P0DMV2* / P0DMV1* / P0DMV0* / CT45A1* / CT45A2* / CT45A3* / CT45A5* / CT45A6* / CT45A7* / CT45A8* / CT45A9* / P0DMU8* / Q9NXZ1* / Q8NHU0* / P0DMU9* / ...ENSMUSG0000007317321


Protein motifs (from Interpro)
Interpro ID Name
 IPR029307  INTS6/SAGE1/DDX26B/CT45, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000182 increased circulating LDL cholesterol level "greater than average concentration in the blood of low density lipoprotein, which normally transports cholesterol to tissues other than the liver" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Gjc1tm1.1(KOMP)Vlcg/Gjc1+
Genetic Background: C57BL/6N-Gjc1tm1.1(KOMP)Vlcg/Ucd

 MP:0001556 increased circulating HDL cholesterol level "higher than average level of high density lipoprotein in the blood; this molecule transports cholesterol to the liver for excretion in bile" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:47439]
Show

Allelic Composition: Gjc1tm1.1(KOMP)Vlcg/Gjc1+
Genetic Background: C57BL/6N-Gjc1tm1.1(KOMP)Vlcg/Ucd

Allelic Composition: Gm648tm1e(KOMP)Wtsi/Gm648tm1e(KOMP)Wtsi
Genetic Background: C57BL/6N-Gm648tm1e(KOMP)Wtsi/Wtsi

 MP:0005178 increased total circulating cholesterol level "greater than the normal concentration in the blood of these most abundant steroids in animal tissues, and precursors to steroid hormones and bile salts; also components of plasma membranes" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Gjc1tm1.1(KOMP)Vlcg/Gjc1+
Genetic Background: C57BL/6N-Gjc1tm1.1(KOMP)Vlcg/Ucd

Allelic Composition: Gm648tm1e(KOMP)Wtsi/Gm648tm1e(KOMP)Wtsi
Genetic Background: C57BL/6N-Gm648tm1e(KOMP)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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